YALI0E18920g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0E18920g

Location

Species Yarrowia lipolytica Positions 2257457..2258350
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 894 (nuc.)
Previous locus YALI0E18898g Next locus YALI0E18942g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E18920g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E18920gYALI0E18920g_mRNA-001YALI0E18920g_CDS-001

Nucleotide sequence

 

>YALI0E18920g
ATGGAAACGGAAAACAAGAAGGAAAACTTGTTCGACGCCATTCAGCATTACGGTCCGTCT
GATGCGGCAGAAAACTTGTTACACTGGCTGCATTTGCCATCAGCACAGCTTGCAGGGCTG
ATCACTCTGACCGGAGCTCCAAGATCAGGCAAAACCACGGCGCTGTACGAGCTGTGCCGT
GTGTGTTTGCCATTCGACACTCCAGGAGGCGAGAACAAGACGGTTCTGGTTCTGGATCTC
GACAGCTCATGGACGAAAAACAACGTCATCAACTACTTTGTGCTGGATCAATCCACTGGT
CTGGGTGAAAATGTGCTTGCCAGTTATATTCGCCAGAACCTCGTGATTGTGAAAACCACC
TTCGACCAGCTCGCCACCGAGCTGCAATCAGACACAATCATCGGACACATTGAAAAGTCA
AACAACAGCTCGAAAATCAGATACGTGATCGTGGACTCTTTCTCCACCGGGCTGAATGGA
CCTCCTGACGCTCATAAGAAGGCTGCCTACGACGCCACCATCGTGAAAATCGTTCACAAT
GCTCTGGAAACACAAAAGATTCTTCAGATCCATATTGCATTCACGTTTCTGTACACCACC
TTCACAGATCTCCCCGAAGACGACAAGACTCCCCTAAAACCAGACGAGATCATGTCTCGA
CTCCCGTACATCATTCCCGAGCTGGCCTCGGTCATCATTGCACTAATCTTCTTCGACAAG
ATCAAACAACAGGTGGAAATCTGGACGCTTTCGGGAATCGTCCGTCGTCAATACTGGAAC
TTTGCCAGTGACCAGAAAGAGGAAGAAGACACCTGTGAGCTCTTTGATTTCGAGACCAGT
GATGAAGAATCTGAAGAGCTTAGCACGTGTTTGTCGCAGCGGGTTTGCATTTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E18920g_CDS-001

Protein length: 298 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0E18920g_CDS-001 METENKKENLFDAIQHYGPSDAAENLLHWLHLPSAQLAGLITLTGAPRSGKTTALYELCR
VCLPFDTPGGENKTVLVLDLDSSWTKNNVINYFVLDQSTGLGENVLASYIRQNLVIVKTT
FDQLATELQSDTIIGHIEKSNNSSKIRYVIVDSFSTGLNGPPDAHKKAAYDATIVKIVHN
ALETQKILQIHIAFTFLYTTFTDLPEDDKTPLKPDEIMSRLPYIIPELASVIIALIFFDK
IKQQVEIWTLSGIVRRQYWNFASDQKEEEDTCELFDFETSDEESEELSTCLSQRVCI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG