YALI0E18942g

Overview

Description some similarities with uniprot|P20048 Saccharomyces cerevisiae YMR013c SEC59 dolichol kinase
Locus type CDS
Locus tag YALI0E18942g

Location

Species Yarrowia lipolytica Positions 2258515..2260374
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1860 (nuc.)
Previous locus YALI0E18920g Next locus YALI0E18964g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E18942g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E18942gYALI0E18942g_mRNA-001YALI0E18942g_CDS-001

Nucleotide sequence

 

>YALI0E18942g
ATGGACTCGAGCACCGTCACCCAGTCGGAGGTCTCCGAGCTGTCGTTTGCAGGAGACCAG
GTCTCTTCGGGAGTCGAATCAGGCCTGGAAGCTGACCACTCCGAGGGCCACGAGTCGGAA
AAGAACGGTCTCAACGAGATCCGACATAGAAACACAAAGCCATGGCCCCAGCTCGTCAAC
CCCAACACCAAGCAGTTCAAACATGGACGAACCCGGTCCAGAGGCTCCCTCGGTACCCTT
GATAGACCCGAGCTAACCCCTGTGGAAACCTCGCAGCAAAAAACCCGAAACGTCATAGAA
GTATTCCTGGTGGTGCTTCCGGCAGCTATCGCCATCTACCACGAACGAGATATCGATCTC
ACAGACCCCAAATACACCACTCTGGTTCTCTCTCTGCAAGTCTGGGTAGCTGGCCTGGCC
ATCTCTCTCAGTTACTGCTACAACAGTGGTATTTTCGTCGCCAACACCCTCTACTTGGCC
TTGATTCCGCCCCTCGTTGCCTACACCACAAACAAGGCATCCACAACACTGCTCTCGGTC
AACCTGTGCCTCGCAGCATGCACCCTGCCTTACCCAACTATGGTCTGGGACAAATTTCTG
GACTTCAACATTGTGGGTCCCACTCTGGCTCTCGAGTATGTGACCCCTCCGTTTCGAACC
CTCAAGTCAACGTATGACTACGTGGAACAGGCCGTGTCGTCCTTGACCCAGGAGTCGCTC
ACAGAGGTCGAAAAGAGACTGCTTTCGTCTCTGGTGGTCAACGTGGTCTGCATGCATCTC
TTCCGAGACCCCTCGCCCGAATCCATTGTGTTGCAATGTCTCTTTCTGGGCTCGGTCTTC
TGTATTTTTCCTACATACCCCTGGGTCGAGCGATCTATCGCCATCATGCGTACCCCGAGA
CACAGAAGACCCTTGCATTGGGAAAAGACGCTCACCAAACTCAGCGTGGCCATTCTCGGC
ACCTTTTTCGTGCTCATGATCATACTGACTGTGCCAGTCTGCACGCATCTGCTTGGAGTC
ACCCCCTTTGAATTCATGTGGCTGTATCTCAACCCCAACGAAGAAACCGGAGTGGACCAC
ACCCGGCTGTACATGATGGCTTACTGGGCGTTGTTTGTGGCGGCCATTCCCGTCATTGAC
AAGATTGGCAACAAGTTCAAGTTCTCGACCGATATTAGACGGAAAATCTGGCACTTTTGC
ATCGTGGGCATGTTCCTGCCCTGCGGAGTCAACACAGATAGCACCTTTACCATGCTAGCC
ATGGGCTGTACATTTGTGCTCTTCATATGGGTCGAGTTCATTAGAGCTACTGCTCTTTAC
CCCATTGGATCCCAGATCCATGAAGCTCTTCTCGCGTATGTGGACGAGCGAGACACTGTT
GGACCCCTAGTGGTATCTCACGTCTACCTGATGCTTGGAATATTTCTGCCGATTCTGTTC
CACAAGTCTCCAATTGGAATCGTGTGTCTGGGACTGGGAGACAGCTCTGCATCTATCGTT
GGACGACGCATCGGAACCATCAAGTGGTTCGACACCAAGAAGTCTGTCCAGGGAACTCTT
GCATTCATCTTTATGGCCTCGGCTGGAATCTACTTCTGCCAACAGCTCATTCCAGGATAC
ACCCACTCTGTCATTAGTGACATGCCTCTGTCTAAGATTGTTGCCACCACCACCGCCACT
GCCTTGCTGGAGGCGAACTCGGACATTAATGACAATGTGGTTGTTCCCGTCTACATGTAC
CTGATGGCGGAGGTTTTGACCAAGTAGTCGAATACTCGTACATTACCATACTAATGTGGC
CAACTGGCCCTCATACTATTTATCATATAGACACATACTAATAGATTGTTTGTATTACAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E18942g_CDS-001

Protein length: 589 aa.
Product: Conserved hypothetical protein

>YALI0E18942g_CDS-001 MDSSTVTQSEVSELSFAGDQVSSGVESGLEADHSEGHESEKNGLNEIRHRNTKPWPQLVN
PNTKQFKHGRTRSRGSLGTLDRPELTPVETSQQKTRNVIEVFLVVLPAAIAIYHERDIDL
TDPKYTTLVLSLQVWVAGLAISLSYCYNSGIFVANTLYLALIPPLVAYTTNKASTTLLSV
NLCLAACTLPYPTMVWDKFLDFNIVGPTLALEYVTPPFRTLKSTYDYVEQAVSSLTQESL
TEVEKRLLSSLVVNVVCMHLFRDPSPESIVLQCLFLGSVFCIFPTYPWVERSIAIMRTPR
HRRPLHWEKTLTKLSVAILGTFFVLMIILTVPVCTHLLGVTPFEFMWLYLNPNEETGVDH
TRLYMMAYWALFVAAIPVIDKIGNKFKFSTDIRRKIWHFCIVGMFLPCGVNTDSTFTMLA
MGCTFVLFIWVEFIRATALYPIGSQIHEALLAYVDERDTVGPLVVSHVYLMLGIFLPILF
HKSPIGIVCLGLGDSSASIVGRRIGTIKWFDTKKSVQGTLAFIFMASAGIYFCQQLIPGY
THSVISDMPLSKIVATTTATALLEANSDINDNVVVPVYMYLMAEVLTK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG