YALI0E18678g

Overview

Description some similarities with uniprot|P87233 Schizosaccharomyces pombe Hypothetical protein
Locus type CDS
Locus tag YALI0E18678g

Location

Species Yarrowia lipolytica Positions 2223301..2224696
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1396 (nuc.)
Previous locus YALI0E18656g Next locus YALI0E18700g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E18678g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E18678gYALI0E18678g_mRNA-001YALI0E18678g_CDS-001

Nucleotide sequence

 

>YALI0E18678g
ATGTCAGATACCGACTGGACCCACGATGACAAGCGACGGAAAATAGAAAAACCGGTCAAA
CAGACCCATGGACACGCCCATCCGCGCCACTCTCATTCGCACACTCGACAGACTCCCCGC
CCCGTCTTCAATGACGATGGAGACTTTGATTTCAACAGCGGAGCAGGAGAAGATGAAGAG
GGACCCACAGGCACGTCTGCAGGCACAGACTCGGCCGACAGCGATCTTTCTCCGATCGAA
AGAGGCCCCAGAAAACACTCGGCAGTGCTCAAGACCCAGATGCAGCAGCCTCCGTCCCGG
GAACGACACAATTCCAACCACGCGGGATACACGAGCGACACCGGAGGCTCTGTGCTCGAC
AACGTGTGTCGGTTGTGCCACCGAGGTAACTCGCCCAAGTCCAACCAGATTGTCTTCTGC
GACGAGTGCAGAACGCCCTACCACCAGCTGTGTCACAACCCTCCCATCGACAGACTGGTG
GTTGACGTGGCAGACGCCCAGTGGTTCTGCAAGTACTGCCAGCCGAAACGACGAGAACGG
CCCCTGGAGACGGGAAAATCAGGAGAGGGCTTTTCGACCCAGGTCAAGAAAACGTACCTC
TCGTCTCTGTCCAAGGCCCAGCTTGTGGAGCTCATTCTGTACGCTGAAAACAACGTGCCT
AAGCTGCCCATCTACTCGCCGCAGACCCATTCCATCGTGCTGCAGATGCAGCTGGAAAAT
TCTAACAAGACGGACACCACCAAGAGTAACCGACGTTTGCTGTCTTCCATCAACTACGAG
GATCTGCTTATCGACACACTCAAGGCCAAGTCGAACGGAGAGGAGGCCAGCGCGCAGCAG
ATTTGGAAATGGATCGCATCAGACACAAACCCAGACACTGTGGACCCCAAGTTTGTTCAG
GCCGCCACTATGGCTTTGCAACGAGCTCTGAGAGAAGGCAAGATTCTGAAACGCGGCAAG
TCGTACCGAGTCAATCCAGATTACCAGAAGAGTTCCGAGATTTCGCTTTCGTTGCTCATT
TCTCTGGACGACGAAGCCATGTTCAGCGACGAGGTCGTGCTCAAGCTGCCTCCTGCTACG
GAGGAGGATCTGTACTACACCATTGACGACAACGACGATGTGTTTAGTGCGCGGTTGCAC
GATGAGCAGGAGCAGGAGGTGTGACACTACTTGCATTCAGACTACAGAGCGGAGAGACAT
TCAGGAGGACAATATTTATTTGCATCACTATAGGTTTAGAACCATATGACATTAATGGCG
GGTATATGACTGCAAGATGGTACAAGTAGTTTACTCTACTTATATACAGCTACTTGTACT
CAATCTAGGGCTTCAGAGAGTACTTGTACCGGTACAGTATGTGTAGTTCATTCAATCGCT
TTGGCGAGTTCATTCT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E18678g_CDS-001

Protein length: 388 aa.
Product: Conserved hypothetical protein

>YALI0E18678g_CDS-001 MSDTDWTHDDKRRKIEKPVKQTHGHAHPRHSHSHTRQTPRPVFNDDGDFDFNSGAGEDEE
GPTGTSAGTDSADSDLSPIERGPRKHSAVLKTQMQQPPSRERHNSNHAGYTSDTGGSVLD
NVCRLCHRGNSPKSNQIVFCDECRTPYHQLCHNPPIDRLVVDVADAQWFCKYCQPKRRER
PLETGKSGEGFSTQVKKTYLSSLSKAQLVELILYAENNVPKLPIYSPQTHSIVLQMQLEN
SNKTDTTKSNRRLLSSINYEDLLIDTLKAKSNGEEASAQQIWKWIASDTNPDTVDPKFVQ
AATMALQRALREGKILKRGKSYRVNPDYQKSSEISLSLLISLDDEAMFSDEVVLKLPPAT
EEDLYYTIDDNDDVFSARLHDEQEQEV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG