YALI0E18656g

Overview

Description weakly similar to uniprot|C5DVP3 Zygosaccharomyces rouxii ZYRO0D08316p
Locus type CDS
Locus tag YALI0E18656g

Location

Species Yarrowia lipolytica Positions 2221251..2223329
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 2079 (nuc.)
Previous locus YALI0E18634g Next locus YALI0E18678g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E18656g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E18656gYALI0E18656g_mRNA-001YALI0E18656g_CDS-001

Nucleotide sequence

 

>YALI0E18656g
ATGAAGCGCGACGAGGAAGCACAGAAGCTAGGGGAGGCCCGCGGCGGGCCGGAGGACCGC
GTGGATGTGCCGCCGGTGAAGAAACGAAACGTGGGCACCAGGGCTCTGAGAGCATGTGAT
ATGTGTCGCCATCAGAAGACGCGATGTTTCCCCAAGCCCGATGGACCCGGGTGTCTGCGA
TGCCACGTGCTCAACACAACGTGCTCGTTCATCGACAGCGACAAGGATGACTTTGATGCG
TCGCAAAACCAAAAACAGTTCCCCAAGGTGCCGGACGAGGTCAATGCGCGTCTGGACCGA
ATGGAGAAGACCATGGAGAGCATGATGGAGATGATGAAGGAGCTCAAGGACAATAACAAC
AACAGCAGCAACGGTGGCAGGCGGCCGACATCGGTGGCGTCAGCAGGACGACTCACGCGG
GCAACAACGGCCTTTTCACCCGCAACAGCAGCAGACTTCAATTACAGAAACGTGATCGCT
TCGTTCGGCACCCCAGCCGTTCAGTACGTGACGTCTCCTTTCCAGATTATCGCCGGTATT
CTGCCCGAAAAACACATTCCACTGCCTGTCCAGCGGCTCATGAACCCGCAGATGGTGCTC
CATGACCAGGACGTCATTTCTATGGATATTGTCAGTGAAGCCATGGTGCTACGATTCCTG
CAAGAGTTCCGACAAAACTGCGGACGATGGGTCTCGTTTCCCATGGATCTGCCGGCAGAC
CAGCTGCTTGTGCGCATCCGACAGCGATGTTCTCTTCTGCTGACTGTCGTTTGCTGTGTT
TCACTGAGATACAATCCCCATATGGCCGAATACAAGTCCAAGGTGTACCCTCTTCTGCTC
AACAAACTACAACAGGAACTGACAGCATCGCTTCTGGTAGTGCCACAGACGATCGAATTC
ATGCAGGCTCTGACCCTGCTGTCAATCTACGGTCTGTCGCTTTCAGCCAAGGAATTTGTG
ATTGATTCATGGTTCATCTCGTCGGTAGCTCTGCAGCATTTCATCACCAAGGACGCCCTT
GGTCTGGTCATGTCTGCGGATGGAATCTCGCCCGTGACGGAGTTTGACGAGGTCACCACC
TACCGAGTGTGGAACCATCTGTGTCTGGCACACCTGGTCAACTGCGTCATGACTGGAAGA
ATGTGCATTCTCGACGAAATCCGGCTGGACCAGTGCCGTCGATCTCTGGATCTTTCTTCC
GCTACTAACTTTGACGGCCGAATGATAGCCGAAATCTCCTTCCAGCTCATTGTCTACAAC
TTCATCGAGACGCTGCAGCCATTGCAAACGTTCGAGGACGAGCTGGCCCAGTGGCTGGAA
GAGTGGGGGTACCTGTTTGAACAACCAACGACCCAGTTCACAGAAATGGGTTACCATTAT
GGCTATCTGGTGGTGCTCTACCACTCTCACTACCGATCTTTGTATCTCAAGAAGAAGAGT
CAAAAACCTACTAGTGGAGGAGTGGATCTGAACAATGATAAGCGCGGCTTCACGTCGTTA
CTGGAGCTCACAGAACTGTCTGATTCCGTCTTTGATCCCTTTGCTCTGGGCCTGGTATCG
GACGACCCTCAATTCACAGTCGTTAGCGATGTCCTAGAGGAAGTCAACCTATCTACACTC
TACAAAATGGCCTCTCTGGGACGAAAAGTCATCGACGGTTTGCTCAATGTGGCTGATGAC
GAGTACTTCAGACACCTGTCGGACCAGCTGCACTTTAGTGGAGTCTTCACAGGTCTGCTG
CTGTGCAGAATGATGTCTGTGATCAGAGATAGACAGGCCAACAAGAAGCCCAACTCGGCT
TCCGACGCCAAAGAGGCCTCGGAAACACACTTCCAGACTGTGGCTGACGTGGACGTCTGG
ATCAGAGAAATGCTCAGCAAGGTCGTGGCGTTGTCAAAGCGTTTCCATCAAAACACAAGC
CTCGACACTGATCTAGTCAAGAAGTACGCCCTGGCTCTCGATGAGAACATTGCCTTGTTA
ACCAACACCGTTGATGTTTCCTATGGCTAGGAAAAGACACACGTCAACAATAGTGAAACT
ACCCAGTAATAGAATGAACTCGCCAAAGCGATTGAATGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E18656g_CDS-001

Protein length: 670 aa.
Product: Conserved hypothetical protein

>YALI0E18656g_CDS-001 MKRDEEAQKLGEARGGPEDRVDVPPVKKRNVGTRALRACDMCRHQKTRCFPKPDGPGCLR
CHVLNTTCSFIDSDKDDFDASQNQKQFPKVPDEVNARLDRMEKTMESMMEMMKELKDNNN
NSSNGGRRPTSVASAGRLTRATTAFSPATAADFNYRNVIASFGTPAVQYVTSPFQIIAGI
LPEKHIPLPVQRLMNPQMVLHDQDVISMDIVSEAMVLRFLQEFRQNCGRWVSFPMDLPAD
QLLVRIRQRCSLLLTVVCCVSLRYNPHMAEYKSKVYPLLLNKLQQELTASLLVVPQTIEF
MQALTLLSIYGLSLSAKEFVIDSWFISSVALQHFITKDALGLVMSADGISPVTEFDEVTT
YRVWNHLCLAHLVNCVMTGRMCILDEIRLDQCRRSLDLSSATNFDGRMIAEISFQLIVYN
FIETLQPLQTFEDELAQWLEEWGYLFEQPTTQFTEMGYHYGYLVVLYHSHYRSLYLKKKS
QKPTSGGVDLNNDKRGFTSLLELTELSDSVFDPFALGLVSDDPQFTVVSDVLEEVNLSTL
YKMASLGRKVIDGLLNVADDEYFRHLSDQLHFSGVFTGLLLCRMMSVIRDRQANKKPNSA
SDAKEASETHFQTVADVDVWIREMLSKVVALSKRFHQNTSLDTDLVKKYALALDENIALL
TNTVDVSYG*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG