YALI0E18414g

Overview

Description similar to uniprot|P40357 Saccharomyces cerevisiae YGR009c SEC9 protein transport protein
Locus type CDS
Locus tag YALI0E18414g

Location

Species Yarrowia lipolytica Positions 2193807..2195786
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1980 (nuc.)
Previous locus YALI0E18370r Next locus YALI0E18436g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E18414g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E18414gYALI0E18414g_mRNA-001YALI0E18414g_CDS-001

Nucleotide sequence

 

>YALI0E18414g
ATGGGGTTCAAAAAGATGTTCAAAAAGAAGGATCCGACCGAGTCGGAGATCCGGGAGTCG
ATGCAAGACGCGGGTCTGTTGGTCAAGACCGACGTCAACGGCTACAACCGAAACAAGTTC
GATGCATACAAAAACTACGCCGCCCAGGTGACCCAGAAGTCGTCTGCGGCTCCTCCGGCG
GCCCGAAGCAACCCCTACGCCGTCCAGAACCAACAGCCCAGCGGAGGAAACCCCTACGCC
GCCGCCGCCGCAGGTGGAGCGTCCGGATCACCATACGGAGGCAGTGATCCATACAGCAAT
GGAGGTGGCGGCAACGGCGGTAGCAACAGCAACGGCGGTAGCAACAGCAACGGCGGTAGC
AACGGCAGCCCCTACAAAATGAACAACGGTGGCAACAACGCCGCTCCCCCGCCCGCCACA
AACAGTCCCTACAGCATGCCTCAGAATGGAGCACCACCAAAAGAATCCCCAGCCAAGTCG
TCCAAGTTCAAGCGGTTTGGACGAAGCAAAAAGGAAGAGGCACCTCCACCCCTGGAAGAC
CCACGACTTCGACCGCGCCAATACGTGGCTCCCACAGACTACAACGACGCAGAACGAGAC
GACTACGAGCCCGTTTATGACGTGGGACTGCCCGAGGAGCCCGAGCTGCCCCCGCCCCCC
ATGCCAGGTGCCGTCAACCCCTACGCATCTGCCAACCAGGGCTACGGATCGCGGTTTGGC
AACGTTGACCGGGAGCTCGAGGAGGACAAGACTGCGCTGTTTGGACCTCGAGACGATCCG
CCCATGGACAGCAGCTACAACCCGGCCCTGTCTGAGCAGCCCAAGTACGCCGAGTCGGTC
ATGTCTATGCCTCGACAAGAGCTGTCTCAAAAGGTGCGTCAGAAAGAACCGCCTGCTGCG
CCTGCTCCTCAGACGGCTGCCGTGGCCGAGTATTCCGAGGCGACCGTGGCGGTTGATGAG
GAAGAGGATCTGCTTCTGGGAGGAGGGTCTACTCTCAACCTCGGCCGGGTCGACTCGTAC
TCATACGGCAACGAGCAGGAGTACGGCAAGCAAAACTACACGTACAACTACAACCAGGGC
CACGAGTTTGACACGGTGCTTGAGGAGGAGGAGAAGACGGAGCAGGAGCAGGAGGATGAG
GACGTGGAGGCCGTCAAGCAGCAGATTCGGTTCACCAAGCAACAGTCTGCCGCTTCGACT
CGAAACGCCCTTCGACACGCCGCCGAGGCCGAGGAGAGTGGCCGAAATACCCTTGGTATG
CTTGGATCTCAAGGTGAACGGCTCTACAACATCCACAGCACTCTGGCTTTGGCCACCACA
CAACACAAGATTGCCGAGGATAAGGCCAAGGAGCTGAAGACAGTGACGCGGTCCATGTTC
GCTCCTCACGTGAGCAACCCGTTCAACTCGAAGCGACGAGCTCAGGAGAAGGAGGACCGC
ATCCGCCGAGAGCGGGCGGTGGCGCAGGTGGAGAGGGAGCAGCGACGCCGTGACGCTTAC
GACTCGCAACAGCGAGTGGTGGGTGCTCTGGACGGTGTGGGCGAGAAGTCCAAGCACCGA
AAGGAGATGATGAGCAAGTACGGCAGCCGACCGGGCCGAGACCGATACCAGTTTGAGGCC
GACGAAGAGGATGATATTCTGGAAGACGAGATTGACAATAATCTCGACGAGCTCAGCAAC
GCTGCTGGCCGTCTGAAGAAGCTGGGTTTGGCCATGAATGAGGAGGTGGAGCAGCAGAAT
GAGAAGCTGGACCAGATTGCCGAGCAGACGGACGATTTGGACATTTCTGTACATCTCAAT
ACCGCTCGTCTTGCTGGTATTCACTAGTACCTGTACTTGTCCAGAGCCAGCAAAGTGCGT
TCTCTCTGGCCATACTGTCCTCTGCACTTTCTCACGGTGATTCCAGACTCTTCACATGTA
ATTATTATAGTGTCCGACGAAATTGAATCTCATACTAACTCGATAGATATCGTCATGTGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E18414g_CDS-001

Protein length: 609 aa.
Product: t-SNARE protein required for secretory vesicle- plasma membrane fusion, putative

>YALI0E18414g_CDS-001 MGFKKMFKKKDPTESEIRESMQDAGLLVKTDVNGYNRNKFDAYKNYAAQVTQKSSAAPPA
ARSNPYAVQNQQPSGGNPYAAAAAGGASGSPYGGSDPYSNGGGGNGGSNSNGGSNSNGGS
NGSPYKMNNGGNNAAPPPATNSPYSMPQNGAPPKESPAKSSKFKRFGRSKKEEAPPPLED
PRLRPRQYVAPTDYNDAERDDYEPVYDVGLPEEPELPPPPMPGAVNPYASANQGYGSRFG
NVDRELEEDKTALFGPRDDPPMDSSYNPALSEQPKYAESVMSMPRQELSQKVRQKEPPAA
PAPQTAAVAEYSEATVAVDEEEDLLLGGGSTLNLGRVDSYSYGNEQEYGKQNYTYNYNQG
HEFDTVLEEEEKTEQEQEDEDVEAVKQQIRFTKQQSAASTRNALRHAAEAEESGRNTLGM
LGSQGERLYNIHSTLALATTQHKIAEDKAKELKTVTRSMFAPHVSNPFNSKRRAQEKEDR
IRRERAVAQVEREQRRRDAYDSQQRVVGALDGVGEKSKHRKEMMSKYGSRPGRDRYQFEA
DEEDDILEDEIDNNLDELSNAAGRLKKLGLAMNEEVEQQNEKLDQIAEQTDDLDISVHLN
TARLAGIH*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG