YALI0E18436g

Overview

Description weakly similar to uniprot|P53983 Saccharomyces cerevisiae YNL008C (ohnolog of YMR119W) ubiquitin-protein ligase activity
Locus type CDS
Locus tag YALI0E18436g

Location

Species Yarrowia lipolytica Positions 2197310..2199446
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 2137 (nuc.)
Previous locus YALI0E18414g Next locus YALI0E18458g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E18436g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E18436gYALI0E18436g_mRNA-001YALI0E18436g_CDS-001

Nucleotide sequence

 

>YALI0E18436g
ATGGACATTCTGGAATTTGTGCAGTGGGTGGGGGGCGACCTCGGGGTGGCGGCGACCGAA
ACGCTGGTCTCAGACTCCGCCCAGATCACCCCCACACTCTCGTCTATCACGGCCCAGACA
GCCACGGCCACGATTCAGTCTGCCCCTCCGTTTGCCGACACTCTGCAGCAAAACCTCGAG
TTCTGGCTCAAGCCCGAGTCCAAGTTCACCATCCACGTGGTCTACATTGTCAGCTCGTAC
GCGTCAACGTCGGTCATCATGGCCGTCATCATGAACCGAATGTGGGAGTTTGCACAGCGC
CGAAGAGCCACGGTGCTGCCGGCTGCCAGCCAGACCATGGCACGAAGTATCCCCATCATG
CTGTCTCTGCCGCACCTGTGGCGACTGTTTAAGGCCTCTGCAACCTGGGGTCCCAGCTGG
ATCGGCGCTCTGGCGCGCTACCTGCTGCCGGCATCTTCGCTCACAAAAGACACCCTGACC
GACGCCTACCCAGGTATGTTCAGGTGCATCTGCATCTCCCAGCTCGTCGAGACGTTCGTG
TCGCTCATCCAGGGCCAGGTGCCGTACTCAGAGTCCAACATGTCTCTGATAGAGTACTCT
CTGTCGTTCCACGAAGCGGCCCAGCTCAAGGAGCCGGTTCCCGAGATTATCGTCATATGC
TTGATGGGGCTCGTGAGCCACGTATTTATTCACCTGCTGGCCATCTTCAAACTCAACAGA
TACAGGCTTATCCCCTCGGCTCTGGTGGGTCTGTCGTTCCTGGCCTTCTTCCAGGTTCAG
GCCATGAAGGGAAGACTGCTCAACTTCCCGCTGATTCTGGTGTTGGGTTTCATGCCCCAG
GTCATCTACACCTACGTCATCTTCAGCACAGTCGTCATGGAGGTGGCCACTATGCTCATG
ACAGGCAAAAGGGTGCCCTCCATTCTGTTTGAACGTGTGTCCCTCTCGCAGGACTTCTAC
ACCTGGTTCGAGGTTGTCAGCAACAACGTTACCAAGTCTGCGTCAAAAAACAGATACATT
AACGCCGGATACCTGGAGACGCCTTCCGAGACCTGGATTGACCAGCAGCTTCGGTTCTTC
CGTGATCCGAACAGAACTCGAGAACTGGGAAGCTCGCCGGGGTACGGCAACCAAGTCTTT
ATGCCCCCTGATGGAGTCAAGCAGTTGATAGACCAATACAATGTGGGTATTGCCAACCAG
CTCATGGACCGCGTTCGTGTTTACGTTGAGTTTCTGCGCATCTATTCCCTCATGGTCTTT
TTTACTCTGAGAGGCATGCTCCGGTCTATTTTCCAGTCCAAGGCTCAGCAGCCGCATACT
CAAAGCTTCCACACTTCCGACGGCGAAACGATAACGATTCTGTCGGCGTCGTTTGCTGAT
GAATCAGAAGAGGAGGACTACGTGTATACCGAACCTGTCTACGACGAGGATGATAGGGCG
TACGAGTTGCACTCGGATTATGGAAGTGAGGAAGACGAGGAGTGGGATGACGAGGTGTAC
GACGACGAGGGAATGCATAGCGACGACGTTTTGGAAGAGCAGATGATGGTCTCAGAGACC
ATTGCAGAACAGGCCATTCTTTCTGAATCGTCTTCTGGAACAGAAACTGAAGAGACTACC
AATACTAGTCGACAGCACAAGAGCCGACTTCGAAAACGTCGCCAGTCAGAACTCCAGACA
TTGTACGACCCCTCGGAACTAACATCCATCATCTCCCAGCCTAATGCAAAGGAGTCCAAG
ATTCTGACTGCCCACATGAACCAACATCGGCTGACACGGTCCAAGTTTGGTCTGTTGGCT
GAAGACGAGGGAACAAAACTCGCCCAGGTGATTATGGAGGCGCGACAACGATATGAAGGC
ATGGAGCGCAAGGACGAACGACGGTACTGTGTTGTTTGTCAGTACGAAGAACGGTCCGTC
ATTGTGTGGCCTTGCCGATGTTTTGCTCTGTGTGGAATTTGTCGCCATGAGTTGCAGTGG
AAGAACTTCAAGGGATGTGTGTGTTGTCGGCGGGATGTTGAGTCTTACTCCAGTGTCTTC
CTTCCATGAAAGGAAGACCCTGAAGACACAGTCTTATGTGGGTTTGCATGTTGAAGCAGT
TTTATAAGTTATAATAATGATGAGATGAAAGGTGTTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E18436g_CDS-001

Protein length: 683 aa.
Product: Conserved hypothetical protein

>YALI0E18436g_CDS-001 MDILEFVQWVGGDLGVAATETLVSDSAQITPTLSSITAQTATATIQSAPPFADTLQQNLE
FWLKPESKFTIHVVYIVSSYASTSVIMAVIMNRMWEFAQRRRATVLPAASQTMARSIPIM
LSLPHLWRLFKASATWGPSWIGALARYLLPASSLTKDTLTDAYPGMFRCICISQLVETFV
SLIQGQVPYSESNMSLIEYSLSFHEAAQLKEPVPEIIVICLMGLVSHVFIHLLAIFKLNR
YRLIPSALVGLSFLAFFQVQAMKGRLLNFPLILVLGFMPQVIYTYVIFSTVVMEVATMLM
TGKRVPSILFERVSLSQDFYTWFEVVSNNVTKSASKNRYINAGYLETPSETWIDQQLRFF
RDPNRTRELGSSPGYGNQVFMPPDGVKQLIDQYNVGIANQLMDRVRVYVEFLRIYSLMVF
FTLRGMLRSIFQSKAQQPHTQSFHTSDGETITILSASFADESEEEDYVYTEPVYDEDDRA
YELHSDYGSEEDEEWDDEVYDDEGMHSDDVLEEQMMVSETIAEQAILSESSSGTETEETT
NTSRQHKSRLRKRRQSELQTLYDPSELTSIISQPNAKESKILTAHMNQHRLTRSKFGLLA
EDEGTKLAQVIMEARQRYEGMERKDERRYCVVCQYEERSVIVWPCRCFALCGICRHELQW
KNFKGCVCCRRDVESYSSVFLP*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG