YALI0E18238g

Overview

Description similar to uniprot|P17649 Saccharomyces cerevisiae YGR019w UGA1 4-aminobutyrate aminotransferase (GABA transaminase)
Locus type CDS
Locus tag YALI0E18238g

Location

Species Yarrowia lipolytica Positions 2178095..2179830
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1736 (nuc.)
Previous locus YALI0E18216g Next locus YALI0E18260g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E18238g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E18238gYALI0E18238g_mRNA-001YALI0E18238g_CDS-001

Nucleotide sequence

 

>YALI0E18238g
ATGCTTCGACTCAAGACCCTCTCTTCCGCCGTTCGAGTGCGATCGGGCGCAGGCTTCGCC
CAGACCGGCCTCCGAGGCTACGCTTCCCTCTGCGAGACCTACTTCCCCAATGAGCCCAAG
GCTCCCGTGGTCAAGACCTCCTTCCCCGGCCCGGCCACCCAGGACGCCCTGCTGTCTCTG
GACTCGGTCTTCGACACCCGAGCAGCCAACTTTGTTGCCGACTACGAAAAGTCCGTCGGC
AACTACATCCAAGACGTCGATGGCAACATCTACCTGGACGTGTACGCCCAGATCTCGTCC
ATTGCTCTGGGTTACAACAACCCCAAGCTGGTGGAGGCCTCCAAGTCGCCCGAGATGATC
TCGTCGCTCGTCAACCGACCCGCCCTCGGAAACTTCCCCTCCTCCACCTACGAGAAGATC
CTCAAGGACGGTATCATCGCCGCCGCTCCTCCCGGCTTCAAGGACGTGTGGACCGGCATG
ACCGGCTCCGACGCTAACGAAACCGCCTTCAAGGCCGCCTTTCTGTGGAGACGAACCATT
GAGCGAGACGGCCAGCCCTTCACCGAGGCTGACGAGCAGTCTGTGATGAACAACCAGGGC
CCCGGATCCGCGTCTCTCTCCATCATGTCATTTGACCACGCCTTCCACGGCCGTCTGTTT
GGCTCGCTGTCCGCCACCCGATCCAAGCCCATCCACAAGCTCGATATCCCTGCGTTTGAC
TGGCCCAAGGCCCCTTTCCCCATGCTCAAGTACCCTCTGGACAAGCACGCCAAGGAGAAC
AAGGCCGAGGAGGAGCGATGTCTCAAGGCCGTGGACGAAATCCTCGCCAAGAACCCCATC
CCCGTGGCCGCCATCATCGTCGAGCCCATCCAGTCCGAGGGAGGAGACAACCACGCCTCC
CCCGAGTTCTTCCAGGGACTGCGAAAGATCACCAAGAAGCATAATGTGCTCATGATCGTC
GACGAGGTGCAGACCGGAGTTGCTGCCACCGGCAAGTTCTGGGCCCACGAGCACTGGAAC
CTGCCCTTCCCTCCGGACATGGTCACCTTCTCCAAGAAGTTCCAGGCCGCCGGCTACTAC
TTCTCGGACCCCAGCATCAAGCCCAACCTTCCCTACAGACAGTTCAACACCTGGTGCGGT
GACCCATCCAAGGCCATCATTGCTAAGACCATCTGGCAGGAGTGCGACAAGCACCATCTG
TCCAACCGGGTGGCTGAGGTTGGCTCCTACCTCTACGGCAAGCTGCAGAAGCTGGCTGAG
AAGTACCCCAAGGAGATCAACAACCTGCGAGGCAAGGACTGTGGTACCTACATTGCCTGG
GACGCCTCCTCCGGCAAGGCCAAGGACGCCCTGGTGTCTGGAATGAAGGCCTTTGGTGTC
AACATTGGCGCCTGTGGCGTCCAGACTGTTCGTCTGCGACCCATGCTGGTCTTTGAGGAG
AAGCACGCTGATATTCTTGTCGGTGCTCTTGACTCGTACCTTTCTCAGGCCAAGTAGTTT
GGGAGGTTATGATAGTAATGATATGCATGTGAAGTGAGGAGTGAGTCAATTTGTACTGCT
AAGGTAAGTACAGTATAAGTAGAATGAACATACTCACAACTGTATGACTCAGCATTTGAG
AAGGATGAGAGTATAGAGTATAGGAGGACCATATGGCTACAAGTACAAGTAGGGTGTATT
ATTCTGTAGAGAGAGGCTACAATTGACATATGACTAATTGTACGATAACTTTGAGC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E18238g_CDS-001

Protein length: 499 aa.
Product: Gamma-aminobutyrate (GABA) transaminase, putative

>YALI0E18238g_CDS-001 MLRLKTLSSAVRVRSGAGFAQTGLRGYASLCETYFPNEPKAPVVKTSFPGPATQDALLSL
DSVFDTRAANFVADYEKSVGNYIQDVDGNIYLDVYAQISSIALGYNNPKLVEASKSPEMI
SSLVNRPALGNFPSSTYEKILKDGIIAAAPPGFKDVWTGMTGSDANETAFKAAFLWRRTI
ERDGQPFTEADEQSVMNNQGPGSASLSIMSFDHAFHGRLFGSLSATRSKPIHKLDIPAFD
WPKAPFPMLKYPLDKHAKENKAEEERCLKAVDEILAKNPIPVAAIIVEPIQSEGGDNHAS
PEFFQGLRKITKKHNVLMIVDEVQTGVAATGKFWAHEHWNLPFPPDMVTFSKKFQAAGYY
FSDPSIKPNLPYRQFNTWCGDPSKAIIAKTIWQECDKHHLSNRVAEVGSYLYGKLQKLAE
KYPKEINNLRGKDCGTYIAWDASSGKAKDALVSGMKAFGVNIGACGVQTVRLRPMLVFEE
KHADILVGALDSYLSQAK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG