YALI0E18216g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0E18216g

Location

Species Yarrowia lipolytica Positions 2171557..2172859
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1303 (nuc.)
Previous locus YALI0E18194g Next locus YALI0E18238g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E18216g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E18216gYALI0E18216g_mRNA-001YALI0E18216g_CDS-001

Nucleotide sequence

 

>YALI0E18216g
ATGAAGTTGGAAAACATTTTGAATGAGGCATCAAGAGAAAAGTCCGAGGTTCCAGGTCCG
GATGCCACTCAGGCTGAGGACGGGTCCAAGCGCGACGGCAAGCTGCCTGCACACGACCAC
CACCCCCAACGCAGACCCTCGGTCCATTCGCCCACCAGCACCAGTACAGCTGCCGGCCAG
GTGGTTGCACCGAGTGGACAACAGGGACCAAGTGGACCTAGTGGGCCGAGCGTACAAGCG
CCGAGTGGCGCACAAACCACGTCCAACCAGATTGCGGCTCCCGGACAAATGTCTCGTCCT
CCGAGCACGGGCCACTTTGGAATGCAGCCGGTTCCACAACCACACGAATTCATTCCGGGG
CCATTGCACGCGCCCCAGCCCTATTATCCGCATCATCTACAACACCAGGGCCACTTTCCG
CCCCTGCAACCGATCCAGATCCCCCAGTGGACCGCTCCGCACCACGGCCATCATCCCAGT
CTGACCCCTGGGCCCTCGCCGACCGCCACGGCCCCTGAACATCGTCACAGACGCAACTCG
TCGGTCTACTCGCCGTATCAGCGGCCTCGTGGCGGCTCCGTGGGCCATCTGGGGCCCGTG
CCCACCACCAGCTCACATTTGCCGCCTCCAGCCACAGTCACGTTTGCTCGGGGCGGCTTT
GAAGACAAGACCAGCGACGGCAGCCAACGGAAACGCAGCAAGGCGCCCAACAGCACGTGG
ACCATGGAGGACGACAACCGGCTGCTGGACCTGGTGCTGGCCACGTTACCGCGGCAGGAC
TACGCCGAGTACGCCCGTCTGCTCAACAAACGGGACAGTCAGACGGTGCGGTACCGGTGG
AAGGTGTTGGTTCGACGGGCACGGGGCGAGGGAGAGCAGCAACAGCAGCAGCAACAACAG
CAACAACAGCAACAGCAACAGCAACAGCAACAACAGCAGCAGCAGCAGCAGCAGCAGCAG
GACAGGTAGGGTCGTGGGAACAGGGCAATTACTACTACTACAATAACACACAAACAAGAA
AACAAGACCAAGACCAAGACCAAGACCAAGACCAAGGATAGCATGGAAGGAGGGTAGGGG
AGACAAGAGCACACAATACAGCTTTTGGCAGGGCAATACACACGTCCTTGCCGGCGGCGG
GGCCTTGTTTCCTCACCCAGTGTAATATACGCATTGTCATTTGCAGAGGAGAGAAATTTG
CAGCGGTGGAATGTATAATATGGCTTTTGCAGCTCTGACGGTGGCTGGGGTGTCTCAGTT
GTTGTTTGGGTCGCGGCTAACTAATTTAACAGTTTGAAAGTGC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E18216g_CDS-001

Protein length: 323 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0E18216g_CDS-001 MKLENILNEASREKSEVPGPDATQAEDGSKRDGKLPAHDHHPQRRPSVHSPTSTSTAAGQ
VVAPSGQQGPSGPSGPSVQAPSGAQTTSNQIAAPGQMSRPPSTGHFGMQPVPQPHEFIPG
PLHAPQPYYPHHLQHQGHFPPLQPIQIPQWTAPHHGHHPSLTPGPSPTATAPEHRHRRNS
SVYSPYQRPRGGSVGHLGPVPTTSSHLPPPATVTFARGGFEDKTSDGSQRKRSKAPNSTW
TMEDDNRLLDLVLATLPRQDYAEYARLLNKRDSQTVRYRWKVLVRRARGEGEQQQQQQQQ
QQQQQQQQQQQQQQQQQQQQDR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG