YALI0E18139g

Overview

Description similar to uniprot|Q09887 Schizosaccharomyces pombe SPCC584.13 Putative amino-acid permease
Locus type CDS
Locus tag YALI0E18139g

Location

Species Yarrowia lipolytica Positions 2141931..2143617
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1687 (nuc.)
Previous locus YALI0E18117g Next locus YALI0E18161g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E18139g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E18139gYALI0E18139g_mRNA-001YALI0E18139g_CDS-001

Nucleotide sequence

 

>YALI0E18139g
ATGGACGCAGATCAAGCCCATCTTGAGGCGCTCGGATACAAGGAGGAGTTCAAACAAGAA
TTCGGCCTGTGGTCCACGTTCGCCGTCTCCTTCTCCGTCCTCGGACTCCTCCCCTCCATT
GCATCCACCCTCTTCTACGGACTGGGATACGCCGGAACCGCCGGAATGACGTGGGGCTGG
CTCATCGCCATGGTCGGCGTGCAGTCGGTCGCCATGAGCATGGCAGAACTGTGCTCGTCA
ATGCCCACCTCCGGTGGTCTCTACTACGCCGCAGCGGTGCTGGCGCCCCCCAAATGGGGC
CCTCTCATGTCGTGGCTCACGGGGTGGTCCAACTGGCTCTGCCAGGTCACGGCCGCACCC
TCGGTCAACTATTCTACCGCCTCCATGATTCTCGCCCTCAAAACACTGCACGACCCCTCC
TACACTGCCAAAACATGGCACGTGTATCTGCTCACTCTGGGCATCATGTTCTCGCACGGC
ATCATCTCCTCCATGCCCACACGGTTCATTGCACGGTTCAACAGTGCCGGAACCCTCATG
AACACCCTGTGTCTGTTTGTGGTGCTGTTCATGATTGTCGGCGGCGCCCAGCCCGGAGAA
GACGGCCACAAATTCAACAACTCCCATGAGGTGTGGTCGTTCATCGACAACCAGACCGAC
TGGCCTAACGGAATCGCCGTGCTCATGTCCTTCATCTCCATCATCTGGACCATGTCCGGC
TACGACTCTCCTTTCCACCTGGCGGAAGAGTGCTCCAACGCCTCCGTGGCCGCTCCCCGA
GCCATCGTCATGACCTCCGGAGTCGGAGGACTCATGGGCTGGGCCTTCCAGATCGCCATC
GCTTACACGGTCCGAGACGTGGCCGGAGTCACCCAGGACGAGCTCGGCCAGCCCTTTGTC
ACCTACCTGCAACAGTGTCTGACTCCACGGTTTGTCACCACAATCACCGCCCTCACCATC
ATCTCGGGCTTCTTCATGGGCCAGGCCTGCATGGTGGCAGCGTCGCGAGTCGCCTTTGCC
TACTCTCGTGATGGCTGCTACCCTCTGTCCCACATCTGGGCCCAGGTCAACCCCTACACC
CAGACGCCCGTCAACGCCGTGTGGTTCAACTGGATCATTGGTCAGCTGCTTCTGCTTCTC
ATGTTTGCTGGTGACACCGCCATCGGCGCCATTTTCTCCGTGGGAGCCATTTCCGGCTAC
GTGGCCTTCACCATGCCCATTGGCATCAAGGTCTTCTGGTCGTCGGATAAGTTCAAGCCC
GGGCCCTGGAACCTTGGCCGATGGTCGCGGCCCTGCGGCATTCTGTCGGTCGCCTATGTG
GCGCTCATGACCCCCATTCTGTGTCTGCCCCAGTACAAGGGCAAGAACCTCGATCTCGAC
ACCATGAACTGGACCGTGGTGGTCTACTTTGGTCCCATGCTTCTGGCGTTTGGCTGGTTC
ATGATCGACGCACGAAAGTGGTTCAAGGGCCCCAAGGTCAACGTCCAGCATGCCATCCAC
AAGGACCACGAGCTTGAGGAGCAGTCCACCAATGGCGTGGAGTTCTTGTCGGGCGTTGAG
CCCAGCGGATCGGGCAACTCCTATGAGGAGCACTCCAAGGCCAAGGACTGGGCTCGAGCC
GACCAGGTTTAGTTTGGACTTTATGCCGTATTTATTTGCATAGTGAATGTTTACTTGATG
AGTTAGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E18139g_CDS-001

Protein length: 544 aa.
Product: Amino-acid permease, putative

>YALI0E18139g_CDS-001 MDADQAHLEALGYKEEFKQEFGLWSTFAVSFSVLGLLPSIASTLFYGLGYAGTAGMTWGW
LIAMVGVQSVAMSMAELCSSMPTSGGLYYAAAVLAPPKWGPLMSWLTGWSNWLCQVTAAP
SVNYSTASMILALKTLHDPSYTAKTWHVYLLTLGIMFSHGIISSMPTRFIARFNSAGTLM
NTLCLFVVLFMIVGGAQPGEDGHKFNNSHEVWSFIDNQTDWPNGIAVLMSFISIIWTMSG
YDSPFHLAEECSNASVAAPRAIVMTSGVGGLMGWAFQIAIAYTVRDVAGVTQDELGQPFV
TYLQQCLTPRFVTTITALTIISGFFMGQACMVAASRVAFAYSRDGCYPLSHIWAQVNPYT
QTPVNAVWFNWIIGQLLLLLMFAGDTAIGAIFSVGAISGYVAFTMPIGIKVFWSSDKFKP
GPWNLGRWSRPCGILSVAYVALMTPILCLPQYKGKNLDLDTMNWTVVVYFGPMLLAFGWF
MIDARKWFKGPKVNVQHAIHKDHELEEQSTNGVEFLSGVEPSGSGNSYEEHSKAKDWARA
DQV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG