YALI0E17919g

Overview

Description similar to uniprot|P48525 Saccharomyces cerevisiae YOL033w MSE1 glutamyl-tRNA synthetase, mitochondrial singleton
Locus type CDS
Locus tag YALI0E17919g

Location

Species Yarrowia lipolytica Positions 2111086..2112787
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1702 (nuc.)
Previous locus YALI0E17897g Next locus YALI0E17941g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E17919g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E17919gYALI0E17919g_mRNA-001YALI0E17919g_CDS-001

Nucleotide sequence

 

>YALI0E17919g
ATGACGTTGTGGATGCGCACAGGCCCGCGTCTGGCCTTGCCACGTGTCCGGCAGCCATTG
GCCGTGCAGATACAGACCCGACACAGCTCGTTCAGCCTGCGAAAAGCCACCGATAAGAAG
AAGACCCCCAACCCGGCTAAACAGTCACAGGGGCCTGAACGAACCCGATTCGCGCCGTCG
CCAACAGGCCTGCTGCATCTCGGCTCGTTGCGAACGGCCCTCTACAACTACCTGCAGGCC
AAGGTGACGGCGGGACAGTTCCTGCTGCGAGTGGAGGACACAGATCAGACCCGACTGGTG
CCTGGGGCCGAAGAACATCTGTACCAGACTCTGGACAAGCTGGGGATCAAGGCTGACGAA
AGCCCCAAGGTGGGAGGACCCTACGGACCGTACAAACAGTCGGAGAGATCGGACATTTAC
AGAAAGTACGTGGACCAGCTGCTGGAGTCTGGACATGCGTACAAGTGCTACTGTTCCAAG
GACCGACTGGATGATCTGCGAGACAGTGCGCGGGCTCTCGTGCCTCCTTCCATGGCCTCA
TACGACCGAAAGTGCGCGCATGGCGTGGCTTCCGACTCCAACAACGGAGAATATGTCGTG
CGTTTCAAGGCCCCCGACCTATACCCTTCTTACACGGACGAATTGCATGGACAGGTGAAC
ATCCAGGTGCAGAGAAACGCCAACGATACCCGGTTTGACGACATTGTGCTTCTCAAGAGC
GACGGACTGCCCACTTACCATCTTGCCAATGTCGTTGACGACCACCTCATGAAGATCACC
ACGGTTATTCGGGGCGAAGAATGGATGCCCTCCACCCCCAAGCACATTGCTCTGTATGAG
GCGTTTGGCTGGACCCCTCCTCGGTTTGTGCACATTCCCCTGCTGACTTCTGTGGACAAC
AAGAAGCTCAGTAAGCGGTCTGGGGACATCGACGTCATGTCTCTTCTTGAGAACGGCTAT
CTGCCCGAGGCCATTCTCAACTTTGTCCTGCATTTCGGCTGGTCCCACAACCACATTCAG
GCGTCGGATCGAATCGGTCTGTCGCGAATGGAGCAGATTTTCGACCTCAAGACCCTTACC
AAGGGCAATGCCAAGGTCGACTTCAGCAAGCTTGTCTACTACAACAAGCACTACATGTAT
GGTCGAATCAAAAACCCGGGAGACAAGGAGTGGATCAAGCCGTACTACGAGGCCATGAAG
AAGGAGACGGGCACCACCAAGACGCTGGACGACTGCCTGACCGCCATGGAGATCATGAAG
GGTTCCTTTGGCAACGTGGAGGAGTTTGTAACCACCTGTCGGTTCCTGTTTGAGCGGCCC
ATGCGGCCCATGCTCACTCTGGAGGAGGAGAAGATGGTTCGAACCATTGCAGAGGCCAAG
GACGTCAAGATGGGCATTGCTATACTGGATACCCGATACGATAAGAAGCAGATTTACCAG
GTGCTTCGTAAGGTCATTGCTGACGGCACTCCGGGGGCGAGCATGGACAAGATCCGGTGG
TTTCTAGGCAAGGAGGAGGTTCAGGCGAGATTGGAGGGGTTTTAACGAGCAAACTCATGT
GGGGCAGTGGTCGGGTTAGTGTGACCGTGGTTCCGTCAGTCGGATAATGATCGGGACAGT
CTGACAATCACCGTTGGAGCTCGTTTTGGTACAACCCTTTCGGGGAATCATGTAAATAGC
GAATACCATAACATTGGAAGGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E17919g_CDS-001

Protein length: 515 aa.
Product: Mitochondrial glutamyl-tRNA synthetase, putative

>YALI0E17919g_CDS-001 MTLWMRTGPRLALPRVRQPLAVQIQTRHSSFSLRKATDKKKTPNPAKQSQGPERTRFAPS
PTGLLHLGSLRTALYNYLQAKVTAGQFLLRVEDTDQTRLVPGAEEHLYQTLDKLGIKADE
SPKVGGPYGPYKQSERSDIYRKYVDQLLESGHAYKCYCSKDRLDDLRDSARALVPPSMAS
YDRKCAHGVASDSNNGEYVVRFKAPDLYPSYTDELHGQVNIQVQRNANDTRFDDIVLLKS
DGLPTYHLANVVDDHLMKITTVIRGEEWMPSTPKHIALYEAFGWTPPRFVHIPLLTSVDN
KKLSKRSGDIDVMSLLENGYLPEAILNFVLHFGWSHNHIQASDRIGLSRMEQIFDLKTLT
KGNAKVDFSKLVYYNKHYMYGRIKNPGDKEWIKPYYEAMKKETGTTKTLDDCLTAMEIMK
GSFGNVEEFVTTCRFLFERPMRPMLTLEEEKMVRTIAEAKDVKMGIAILDTRYDKKQIYQ
VLRKVIADGTPGASMDKIRWFLGKEEVQARLEGF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG