YALI0E17897g

Overview

Description weakly similar to uniprot|Q96U62 Neurospora crassa Conserved hypothetical protein
Locus type CDS
Locus tag YALI0E17897g

Location

Species Yarrowia lipolytica Positions 2109846..2110959
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1114 (nuc.)
Previous locus YALI0E17875g Next locus YALI0E17919g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E17897g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E17897gYALI0E17897g_mRNA-001YALI0E17897g_CDS-001

Nucleotide sequence

 

>YALI0E17897g
ATGTCCAAAGCATATATTGAGCAGGTTGTGTGCAACTTCTTTCAACCAACTCACCCAACA
CCACACTCACTACACCACGTTCGACCTAAGGCTCCACCAGCACCCACTTTCAAAATTCAG
CGCCAAAACGAAACCCCCTTTTTTGCACAGACTCAGATGTACTCGAGACCGCCACAATAC
CAGGGATACTCAGCAAACTACCCGAGCGGGTACAACTCGGAGGTTGTGAGAATGCAGAAT
TGTGAGTATGATCCGACACGGAAAAAAAAAACCGTGACACAGCACAGAACCCGGGGCCTA
GGACGGGAGAGGAGCAGAAGGGAGGGGACTAGTAGGACTGGAGAGTGGGAGGCCGGAAGA
GACCAGCACTACCACGGTGTTTGTGTCTTTGGCGCATCTCTCTCTCCCCCTCTCTACTTG
TCTGGTCACACGTGCATCTTGTACTTGCTCGCGTTCATGTGCTTCTCCACGGAGAGAATG
TAGGTGGGCCACCAAGCAGGTGGTGAAGAAGGCCGTGATCGCGGGGGAAAGCGTGTTCAA
GACTGTCAAATCCGATGACCGAACTGCTTGTGTCCATCCCAACCCATCACCTCTTCATCT
CTCCTTCCACTACCCCTGGCTGATCTCTTAAGGTGGAGGAAGGACAAGACCCACGCAACA
CGCCCAAAGCAACATACTAACCTAGTGGCAACTTCACGAATCAAATTCAACGCCGGACGG
ACGTTTGACTCGCTCGACGACGTCGAGTTCTGCCCCAACCTCCTCGAGGAAGAACGACTC
AACAATGCATCCCCCCATATGCTGACGCCCGACCAGGAGCTGCGAAACGCCATCTCCAGA
CAGTACGGCGGATCCAACTACTCGTACTCGTCCCCTCTTTCGCCCTCTCCCAGCGGCTCT
GCCGGCGTGACCCGGGCCAAAAAGGCGCTTGAGATCATCGATCCCGCCACCGGACGAGCT
TCCACCCCTACCAACATGGATACCGGCTCCCCTCGGAAGCTCTAGATATTTATTGCATCA
TAACTTATTTAAGCGGAGCACGTTGATTTCCTCAGACTCTTAGAGATGGGCGAAAACCGT
GCTATGATGCGATTAATGTACATTATCGTTTATG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E17897g_CDS-001

Protein length: 187 aa.
Product: Conserved hypothetical protein

>YALI0E17897g_CDS-001 MSKAYIEQVVCNFFQPTHPTPHSLHHVRPKAPPAPTFKIQRQNETPFFAQTQMYSRPPQY
QGYSANYPSGYNSEVVRMQNLATSRIKFNAGRTFDSLDDVEFCPNLLEEERLNNASPHML
TPDQELRNAISRQYGGSNYSYSSPLSPSPSGSAGVTRAKKALEIIDPATGRASTPTNMDT
GSPRKL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG