YALI0E16929g - KGD2

Overview

Description uniprot|Q6C5L8 Yarrowia lipolytica YALI0E16929g KGD2 2-oxoglutarate dehydrogenase complex E2 component
Locus type CDS
Gene name KGD2
Locus tag YALI0E16929g

Location

Species Yarrowia lipolytica Positions 2005669..2007646
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1978 (nuc.)
Previous locus YALI0E16907g Next locus YALI0E16951g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E16929g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E16929gYALI0E16929g_mRNA-001YALI0E16929g_CDS-001

Nucleotide sequence

 

>YALI0E16929g
ATTTTCTTGACCCAAGGTGAGTGAACACGTTGGATGCTGGTGGGGCTCCGGACGCCAATT
GGAGGACTGGGAACGACAAGCCGCAATTGCCGGCCCCATAGAGTGCTGGTCGCACGCTTT
CTCCCGTGCTCTGTCGGAGCCCGTTTCTCTCTTGAGTCCCTCATGCGATAGCTCCGGGCA
ATGCTCTCAGGGAAGAGCCAGGGCTGGTGAGGCATCACAGGTGGTTTCAATGGCACATAA
CCAATGTTATTGTGTCATTGCAAGTCTCTTGGGCCCTCAACATGTTCTGTTTGCTGTGTC
CGATACAAAACAGTGGCAAAGAAGCTGCGAATCACAGCACCTTTAAATGACAACACATTA
CACAGACACACAACCCGCACAGTGTTGTGACACAAATACGAACATGAACACAAGCACCAT
GGCACTCTGTGACAACGACTTTTCCATCACCTTTCTACTCACCCCATGACTAACCCCAGA
TGCTTAGAACAATCAGATCCCAATCCATGCGAATGGCCTCCGCCTCGTCGCGAAGAATGC
TGTCTTCCGCCGCCTCCACATCCATGCTAAGACAAACGCTCAAGGCTCCCTCCATGACCG
CTCAGGTCACTCGACCCACCGTCATGACCTTCAAGCCTGTTCTGCTGTCCCGAGGATACG
CCGACGTTGTTGAGGTGCCTCCCATGGCCGAGTCTCTGACTGAGGGTACTCTGACCGCCT
TTGAGAAGGACATTGGAGACTTTGTCGAGGCCGATGAGGAGATCGCCACCATCGAGACCG
ATAAGATTGATGTTGCCGTCAACGCTCCCTTCGCCGGAACCATCACCGAGTTCCTGGTCA
AGCCCGACGACACCGTCACTGTCGGCCAGCCTCTTCTCAAGATTGAGCGAGGCGAGGGCT
CCAGCAGCGGTGGCTCCAAGCCTCCCAAGGAGAAGAAGGAGGAGAAGACGGAGGAGAAGG
AGGAGCCTGCTCCCAAGGAGGAGTCTGCCCCTGCCCCTAAGAAGGAGGAGGCCCCCAAGA
AGGAGGAGTCTGCCCCTGCTCCCAAGAAGGAGGAGAAGAAGCCCGCTCCCAAGGAGGAGA
AGAAGACCGATGCCACCGAGGGTCTCGGCGGCTTCCGAAAGGAGGAGCGAGTCAAGATGA
ACCGAATGCGACTTCGAATTGCTGAGCGACTCAAGGAGTCCCAGAACACCGCCGCTTCTC
TGACCACCTTCAACGAGGTCGACATGTCCTCTCTGATGGAGATGCGAAAGCTCTACAAGG
ATGAGATGCTCAAGAAGACCGGCACCAAGCTTGGTTTCATGGGTGCCTTCTCCAAGGCCG
CCGCTCTGGCCATGCGAGACGTTCCTGCCGTCAACGCTGCCATTGAGGGCCCCAACGGTG
GTGACACCATTGTCTACCGAGACTACGTTGACATTTCTGTCGCCGTCGCCACCCCCAAGG
GTCTGGTGACCCCCGTTGTCCGAAACGTTGACCAGCTCGACGTCATGGGCATTGAGAAGG
CCATTCACGACCTCGGTGTCAAGGCCCGAGACAACAAGATCACTCTTGAGGATATGGCCG
GCGGAACCTTCACCATCTCCAACGGTGGTGTTTTTGGCTCTCTCTTCGGTACCCCCATCA
TTAACATGCCCCAGACTGCCGTTCTCGGTCTGCATGGTGTCAAGGACCGAGCTGTCGTTG
TTGACGGCCAGGTTGTTTCTCGACCAATGATGTACCTTGCATTGACCTACGATCACCGAG
TTCTCGATGGTCGTGAGGCTGTCGTTTTCCTCCGAACTATCAAGGAGCTCATTGAGGATC
CTCGAAAGATGCTCCTTATGTAACTTATATATAATTGAATGACGCAAGTGAACGACTGAT
AATGAATAAAGGTCTACTGATTTGGTTCGAGTGTACGTAAATGCGAGTGGAGGACATACA
GGCGCGGAGCGTAGAGCGTACATCTAGAGAAGCCATCCTTAATATACATTGATTATCT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E16929g_CDS-001

Protein length: 448 aa.
Product: 2-oxoglutarate dehydrogenase complex E2 component
Gene: KGD2

>YALI0E16929g_CDS-001 MLRTIRSQSMRMASASSRRMLSSAASTSMLRQTLKAPSMTAQVTRPTVMTFKPVLLSRGY
ADVVEVPPMAESLTEGTLTAFEKDIGDFVEADEEIATIETDKIDVAVNAPFAGTITEFLV
KPDDTVTVGQPLLKIERGEGSSSGGSKPPKEKKEEKTEEKEEPAPKEESAPAPKKEEAPK
KEESAPAPKKEEKKPAPKEEKKTDATEGLGGFRKEERVKMNRMRLRIAERLKESQNTAAS
LTTFNEVDMSSLMEMRKLYKDEMLKKTGTKLGFMGAFSKAAALAMRDVPAVNAAIEGPNG
GDTIVYRDYVDISVAVATPKGLVTPVVRNVDQLDVMGIEKAIHDLGVKARDNKITLEDMA
GGTFTISNGGVFGSLFGTPIINMPQTAVLGLHGVKDRAVVVDGQVVSRPMMYLALTYDHR
VLDGREAVVFLRTIKELIEDPRKMLLM*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG