YALI0E15994g

Overview

Description weakly similar to uniprot|P40509 Saccharomyces cerevisiae YIL076w SEC28 epsilon-COP coatomer subunitt
Locus type CDS
Locus tag YALI0E15994g

Location

Species Yarrowia lipolytica Positions 1900537..1901730
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1194 (nuc.)
Previous locus YALI0E15950r Next locus YALI0E16016g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E15994g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E15994gYALI0E15994g_mRNA-001YALI0E15994g_CDS-001

Nucleotide sequence

 

>YALI0E15994g
ATGTCTACTATTGAGAGTGAGTAAGCCGACTCGCCTTACAGCCCCAATTAGTTTCTAACA
CAGATATCCTCGACGCGCGATTGGCGTTTTTCACCGGCGACACCAAGTCGCTTTTGGCCT
CTTCTCCGTCGGAGATCAGAGACGAACACAAAGATGGCGTGGCCTTCCTCAAGTACCGGG
CTGAGATTGCCAGCGGTCTGAGCCCCGCCAGCTTTGATGACGTGTCTTCTCCGGCCACCA
GAGAGGCCCTCAAAGCCTACGCCAAGTTTGTGGCCTCTGGTCACAAGGACGCAGCCATTC
TGTCGGGTCTGGCGTCATCCAACACAGACAACGAAGCCGTCCAGCTGTTTGGCGCCACGG
GCCTATACCTCGAGGGCAAGATGGACGAGGCGCTTTCTCTACTGGAGAAGCACGAGGGTT
CGTTCGAAGCCGTTTTGCTGACCGCCCGGATCCTGGTGGACCAAAACAAGATCGACGCTG
CCCACAAACTCATCCGTGACTACGCTCGAACCTCGGATGATGACGTGGCCTATCTGCTGG
CCTCTGCCATTGTCGCCATGCGGGCCAACGGCGATGACCATGTGCGATCCGCCTACTACA
TTTTCGAGGATCTCTCGCAGCACAAGACTGGCAACATGCTGCTTGGCCAGGCGCTCACAG
AAATCCAACTGGGTCGAATCGACGAGGCAAAGGAGACTCTGTCCAAGGTCGACGAGGTGG
CCCCCCAGGATCCCAATGCTCTCATGGCCAAGATTGTCGTGGGTCTGTCTGAGGGCGACG
ATGTGACCGAGCTTAAGGACGAGCTGAAAAAGGTGGATGCCAAGCACCCCATTTTCGAGG
AGCTAGCCGAGAAGAATGCGCTGTTTGATAAGGTGGTTCTTAAGTACGCCGACAAGATTG
TCGCGTAAGGTGGTATATATTTTATAGGATGATTGTACAAGTACAAGTACAAGTATGGGT
GTAGCGCGATTAGACCGTGAAAGAGGCCAGTCAGCTCACTCTTCCAACAGTCAATCTGAA
TCAGATGGATGTCGGGCAGATAACATGCCGGTTTACGTACATCTCTTCTAATAATATGTA
GGTCTCTCATGGAATTCATGTGTTTCAGGTCCACGTCCAGGTCGTCAGAAAAACTGGGGA
AATGTATGTTAAATATAGACAGAAATGGTTAAAAAAATACATTGTACTCTTGTC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E15994g_CDS-001

Protein length: 287 aa.
Product: Conserved hypothetical protein

>YALI0E15994g_CDS-001 MSTIENILDARLAFFTGDTKSLLASSPSEIRDEHKDGVAFLKYRAEIASGLSPASFDDVS
SPATREALKAYAKFVASGHKDAAILSGLASSNTDNEAVQLFGATGLYLEGKMDEALSLLE
KHEGSFEAVLLTARILVDQNKIDAAHKLIRDYARTSDDDVAYLLASAIVAMRANGDDHVR
SAYYIFEDLSQHKTGNMLLGQALTEIQLGRIDEAKETLSKVDEVAPQDPNALMAKIVVGL
SEGDDVTELKDELKKVDAKHPIFEELAEKNALFDKVVLKYADKIVA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG