YALI0E16016g - FAT1

Overview

Description uniprot|Q6C5Q8 Yarrowia lipolytica YALI0E16016g FAT1 Very long chain fatty acyl-CoA synthetase and long chain fatty acid transporter, putative
Locus type CDS
Gene name FAT1
Locus tag YALI0E16016g

Location

Species Yarrowia lipolytica Positions 1902590..1904627
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 2038 (nuc.)
Previous locus YALI0E15994g Next locus YALI0E16038g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E16016g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E16016gYALI0E16016g_mRNA-001YALI0E16016g_CDS-001

Nucleotide sequence

 

>YALI0E16016g
TTCTCCACTATCACCTTGTCGAAATCCCAACCACAATGACAGCTGGACTAGTTGCTGCCG
CCGCCATTGGAGCCGCCTACCTGGAGGCCAAGACGCTCATCTCCGAAGATGCCTACATGA
TCCGAGGCGCCATGACCAACGGTCTGGATTTTTTCTACAACGCCTGGAAGGGCCGAGTGC
AATACTGGTACGCGTTTGAAGACGCGGTGAAGAAGTACCCCAACAACCCGGCAATCGTCT
ACCCCAAGCCCATCGAGGGCAAGAAGCCCAGCGGCGACTCGTACGACGACCTGTTTGACG
TGGAGACCTTCACCTACCAGCAGCTGTACGATGAGGTGCTGAAAATGTCACACCTGCTGC
GAAACAAGTACGGAGTGACCGCCAACGACACCATTGCCCTCAACGCCATGAACTCGCCCC
TGTTCATTATCGTGTGGTTCGCCATCTGGAACCTGGGCGCCACCCCGGCCTTCATTAACT
ACAACCTGGCCGACAAGTCGCTGCTGCACTGCCTCAAGGTCGGACATGCCTCCATCATGT
TCGTCGACACCGAGGTCGAGGGCAACGTGCGACCTTCGCTGGCCGAGATCAAGTCCGAGG
CCAAGTGCGACACCGTGTTCATGGACGACGACTTCCTCGCTGCCTACGCCGCCTCCCCGG
CCTACAGAGCCCCCGACTACGAGCGACATCCCGAGCAGAAGGACTATGACACTGCCGTGC
TCATCTACACGTCCGGAACCACCGGTCTGCCCAAGCCCGCCATCATGTCGTGGAAGAAGG
CCAAGCTCATGTCGTCGCTCTACGGCCACTCCATCCGGCTCAAGAACAACGGTGTCGTCT
ACTCCGCCATGCCTCTCTACCACTCCACCGCCGCCATTCTCGGCTGTCTGCCCTGCCTCA
ACCGAGGAGCCGCTTACGCCCCCGGCCGAAAGTTCTCTACCACCACCTTCTGGACCCAGG
CCAAGCTCACCAACGCCACTCACATCCAGTACGTCGGAGAGACCTGCCGATACCTGATCA
ACGCCCCTCCCTCTCCCGACGAGAAGAGTCACCAGATCAAGGTGGCGTTCGGCAACGGAA
TGCGACGAGATATTTGGGTCAAGTTCAAGGAACGATTCAACATCCCCGCCATCGGCGAGT
TTTACGCCGCCACCGAGGGTCCTCTCGGAACCAACAACTTCCAGCAGGGTGAGATTGGTA
TCGGTGCCATGGGCCGATACGGTAAGCTTCTGGCTGCCATCCTGGCCACCCGACAGACCA
TCGTTCCTGTGGATCCCGAAGACGAGACTGAGCTGTGGCGAGACCCCGAGACCGGCTTCT
GCCGAGTCGCCCAGTCCGACGAGCCCGGTGAGTTCATCCAGAAGATCCCCAACCCCGAGA
AGGTGCACGAGACCTTCCAGGGATACCTTGGTAACGATAAGGCCACCAACTCCAAGATTA
TGCGAGACGTGTTCAAGAAGGGCGATGCCTACTACCGAACCGGTGATCTGGTGCGACTCA
ACGACGAGCAGTGCTACTACTTTGTCGACCGTCTTGGAGACACCTTCCGATGGAAGTCCG
AGAATGTGTCCACCTCCGAGGTGGAGGAGCACGTTGGCGCTTCCGACCCCAACATTGAGC
AGGTTGTCTGCGTGGGTGTCAAGGTGCCCGAGCACGAGGGCCGAGCTGGTTTCGCCGTGG
TGAAGCTCAAGGACGCTTCTGTCAAGCCCAACCTTGACCAGATTGCCGAGTACTCGCTCA
AGCAGCTGCCCAAGTACGCCGTGCCTCTGTTCATCAAGTTTGTCGACGAGATTGAGCGAA
CCGGCAACAACAAGGTGCAGAAGGTCAAGTACAAGAACCAGAAGATGCCCCATGAGGAAG
GCGAGAGCCCCATTTACTGGCTCAAGGGCAACAAGTACGTGGAGCTCGATGCTGGAGACT
GGGCTTCTCTGGGATCCGGAAAGATTAAGCTGTAAGGAAAGAGAGCAGCAAACAACCGAA
GTGAGTGGCCGTGGGTCACGAATAAATAGATGTTATTATATTGAAAATGTTGAAAGTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E16016g_CDS-001

Protein length: 640 aa.
Product: Very long chain fatty acyl-CoA synthetase and long chain fatty acid transporter, putative
Gene: FAT1

>YALI0E16016g_CDS-001 MTAGLVAAAAIGAAYLEAKTLISEDAYMIRGAMTNGLDFFYNAWKGRVQYWYAFEDAVKK
YPNNPAIVYPKPIEGKKPSGDSYDDLFDVETFTYQQLYDEVLKMSHLLRNKYGVTANDTI
ALNAMNSPLFIIVWFAIWNLGATPAFINYNLADKSLLHCLKVGHASIMFVDTEVEGNVRP
SLAEIKSEAKCDTVFMDDDFLAAYAASPAYRAPDYERHPEQKDYDTAVLIYTSGTTGLPK
PAIMSWKKAKLMSSLYGHSIRLKNNGVVYSAMPLYHSTAAILGCLPCLNRGAAYAPGRKF
STTTFWTQAKLTNATHIQYVGETCRYLINAPPSPDEKSHQIKVAFGNGMRRDIWVKFKER
FNIPAIGEFYAATEGPLGTNNFQQGEIGIGAMGRYGKLLAAILATRQTIVPVDPEDETEL
WRDPETGFCRVAQSDEPGEFIQKIPNPEKVHETFQGYLGNDKATNSKIMRDVFKKGDAYY
RTGDLVRLNDEQCYYFVDRLGDTFRWKSENVSTSEVEEHVGASDPNIEQVVCVGVKVPEH
EGRAGFAVVKLKDASVKPNLDQIAEYSLKQLPKYAVPLFIKFVDEIERTGNNKVQKVKYK
NQKMPHEEGESPIYWLKGNKYVELDAGDWASLGSGKIKL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG