YALI0E14685g - TPS1

Overview

Description uniprot|O74932 Yarrowia lipolytica YALI0E14685g TPS1 Alpha, alpha-trehalose-phosphate synthase [UDP- forming]
Locus type CDS
Gene name TPS1
Locus tag YALI0E14685g

Location

Species Yarrowia lipolytica Positions 1748846..1750330
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1485 (nuc.)
Previous locus YALI0E14663g Next locus YALI0E14707g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E14685g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E14685gYALI0E14685g_mRNA-001YALI0E14685g_CDS-001

Nucleotide sequence

 

>YALI0E14685g
ATGCCCAACGTGCTGGTCATATCGAACCGTCTGCCGGTGACCATTTCCCGCGAGGAAGAT
GGCACCTACAAGTACACAATGAGCTCAGGGGGCCTGGTAACAGCGCTGTCGGGCCTCAAG
CAGTCGACGACCTTCCAATGGTTTGGGTGGCCCGGATTGGAGATCCCCGAAAAAGACAAG
CCGCGACTCATCAATGACCTTGAGACCATGTTCTCGTGCGTGCCCGTGTTCATGGACGAC
GATCTCGCCGACCTCCATTACAATGGCTTCTCCAACTCCATTCTGTGGCCCTTGTTCCAC
TACCATCCCGGAGAAATGAATTTCGACCAGGTGGCGTGGGAAGCTTACACACAGGCCAAC
CGGCTATTTGCCAAAAAGGTGGCATCAATCGTCAAACCCGGCGACATTGTGTGGGTCCAC
GACTACCACCTCATGTTGCTACCCGAGATGCTGCGTGAAGAGTGCGAGAACAACAGCGCT
CTCGACGGCCTGAAGATTGGATTCTTCCTGCACACGCCATTCCCATCTTCGGAAATCTAC
AGAATTTTGCCCGTCCGAAAGGAGGTGCTGACAGGTGTGCTGTCGTGCAACCTCATTGGC
TTCCACACCTACGACTACGCTCGCCACTTTCTGTCGTCCGTCTCTCGAATCCTGGATCTA
GAAACCATGCCCAACGGAACGTATTACAAGGGGCGTCATGTCGTGGTAGGTGCGTTTCCT
ATCGGTATTGATGTCAACAAGTTTCTCGAAGGATGCAAACGACCAGCTGTTCAGGAACGA
ATCGCACAGCTCCAGGATAAGTTTAAGGGCATCAAGGTGGTTGTGGGTGTCGACAGATTG
GATTACATCAAGGGTGTGCCCCAGAAACTTCACGCCTTTGAGGTCTTCCTGTCAGAACAC
CCCGAATGGATCGGCAAGGTCGTGCTGGTGCAGGTCGCAGTGCCTTCCCGAGGACTAGTG
GAAGAGTATCAGAACCTGAGAGCAGTGGTGAATGAGCTGGTCGGACGTATCAACGGTATG
TTTGGTACTGTCGAGTTTACGCCCATCCATTTCATGCACCGATCGGTGGACTTCAACGAG
CTGATTGCTCTCTACTCGATATCAGATGTGTGTTTCGTGTCGTCTACGCGAGACGGAATG
AACCTAGTGTCGTATGAGTATGTTGCTTGTCAAACTGAGAAGCACGGATCGCTGATCTTG
TCTGAATTCACAGGTGCAGCTCAGAGTCTCAACGGAGCCCTGATTGTCAACCCATGGAAC
ACCGAAGACATGGCCGAGGCTCTGTACGACTCTCTGACTTTTTCGCCCGAGAAGAAGGCT
GAGAACCACCGCAAGCTGTTCAAGTACGTTAGTAAGTACACCTCTCAGCATTGGGGCGAG
GCCTTTGTCTCCGAGTTGAAGCGGTGTTGATAGACATAGATAACTATTTATTGGGAGGCC
AGGAGTAGAAAATAATGAAATGCAATAACGAGTGATTAGATTGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E14685g_CDS-001

Protein length: 470 aa.
Product: Alpha, alpha-trehalose-phosphate synthase [UDP- forming]
Gene: TPS1

>YALI0E14685g_CDS-001 MPNVLVISNRLPVTISREEDGTYKYTMSSGGLVTALSGLKQSTTFQWFGWPGLEIPEKDK
PRLINDLETMFSCVPVFMDDDLADLHYNGFSNSILWPLFHYHPGEMNFDQVAWEAYTQAN
RLFAKKVASIVKPGDIVWVHDYHLMLLPEMLREECENNSALDGLKIGFFLHTPFPSSEIY
RILPVRKEVLTGVLSCNLIGFHTYDYARHFLSSVSRILDLETMPNGTYYKGRHVVVGAFP
IGIDVNKFLEGCKRPAVQERIAQLQDKFKGIKVVVGVDRLDYIKGVPQKLHAFEVFLSEH
PEWIGKVVLVQVAVPSRGLVEEYQNLRAVVNELVGRINGMFGTVEFTPIHFMHRSVDFNE
LIALYSISDVCFVSSTRDGMNLVSYEYVACQTEKHGSLILSEFTGAAQSLNGALIVNPWN
TEDMAEALYDSLTFSPEKKAENHRKLFKYVSKYTSQHWGEAFVSELKRC*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG