YALI0E14663g - TFC1

Overview

Description uniprot|Q6C5W2 Yarrowia lipolytica YALI0E14663g TFC1 RNA polymerase III transcription initiation factor IIIC subunit
Locus type CDS
Gene name TFC1
Locus tag YALI0E14663g

Location

Species Yarrowia lipolytica Positions 1746849..1748610
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1762 (nuc.)
Previous locus YALI0E14641g Next locus YALI0E14685g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E14663g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E14663gYALI0E14663g_mRNA-001YALI0E14663g_CDS-001

Nucleotide sequence

 

>YALI0E14663g
ATGGAGGCCAAAAAGCACCAAATCAAGTCGCGTCTGGCGTCCGTCGAGCTGCCCATCAAT
GTGGTAAACGAGGACCGTGCGCTGACTATGCTGGGAGGTCCTGAAAAGGTGGCACGAGCC
ATCAAAAACTCCGACAAGCTGGAGCTGCGATTCAGACCGGAAGACCACTTTGCACACCCC
GTCAATTCGGTGCTCTCAAACGACCAGCACGTGCTGCTCGAAGTCAAGCTGTCGAAAAAA
CTGCTGGAGAAACACAATGGAGACGTGCGAGCTGCTCTTAAGGCACAGGAACAAGAAACG
GGGAAAAGCTCCGACTACAAATGCCACCATATCAGCTCGACACAACGATTCCGAGAAATG
GCTGATTTTCAATGGTGCACCAAAAACTCGCCATTTGTGCACAAGGTGGAGGCCTCGCTG
TTTGCTGGAGACCTCCAAAGAATCAAAGAGCTGGAGCTGGAGGGACCTGGTGATCTCACA
TCTGTCGAAATCGACTCAATTCCACCTCCTCGATTTTCGCTCATCCATTACCCTTTCCCT
TACTACTACAAACAGAACCCCATGGTCACTGTCGTCAAAGATGGCTCTTCTACAAAGCTA
GTGAACGCCAATGCTGCACCCAAGCTGTACTCCTGGGTACTTACAGCAACAGACCCAGCC
CCCACTGGCCCTAGAAAAGAGCTTGCCCCTCTTCCTGAGCCAGATGCTGAGATGGACACT
TCCAACGGAGACGCTAGACGTGACTACTCCGGCAAACCCGCCCAACAGGTGCACGAGAAG
CTACTCAGACAATGTGTGGATGAGCTGCAGGAGCTCTTCAGAGAACGGCCTCTTTGGACT
CGCCAGGGACTGCGTCATTACGTTAACAACCCCGAGCTCAAACACATTCTCAGATTCGCA
TTGCCCTATGTGGCTTACTATTTCCGATCTGGACCCTGGAGAGGAGCCTATGTGGTGTAC
GGAAAGGACCCCAGAACTGACCCCAGCATGCGGTTCTACCAGACAGAAGCTTTTCGAATC
AGCGACAACCAAGACGAAAAGACTGAGAAGGTGGAGGATGACTTGGCCGGTCTTGCCCCT
CCCGTTCAGCCTGCTGCTCAAAAGGCACTTCCCCTGCCGTATGTCTTTGACGGAATTCAT
CCTCCCGAGTCGCAAACTCTGCAGCTGTGCGACATTACTGACCCTCTCTTGTACGAGAAA
ATCCACAGTGCCCCTGTTCGAGCCAAGTACGACGTTCTGGACGGCTGGTTCGAGTACAAT
GACATCAGCAAGATTCGAAAGGCTCTCCGAGCCAAGGTCCGAGGAACTATTCTTAGGGAG
AACTCCGACGAAACCGTGCAGGCCATCTTTGACGCCGAGGAAGAGCAGCGACCTGAAGGT
GATGTTGAAGAGAATCAGGTTGCTGAGGACGACGAAGAGGACGTTGTGGAGGTTGTGGAC
CCCGAGATGCAGCCTGAGACTACAGAGGCGGCTGTTATTACCGAATCCTCTTCGGAGCCC
CCTGTGGAGGACCCTGATCTCAACATGTTCAGTCTTCATCTTAACAACGTCAAGAGCCTG
CGAGACCTGTCGGGTATTTCTCAGCAGCGAATTGACGATAAGGATAAAGATAAGGATACG
GGCAAGGACGAGGGCAAGGACGAGGGCAAGGGCGAGGGCAAGGGCGAGGGCAAGGGCGAG
GGCAAGGACGAGGACAAGGAATGGTAGTACTATTTGTACAACTTGTATGTATTTTACGGT
ATTTAATGTATTTTTAAGAAGC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E14663g_CDS-001

Protein length: 569 aa.
Product: RNA polymerase III transcription initiation factor IIIC subunit
Gene: TFC1

>YALI0E14663g_CDS-001 MEAKKHQIKSRLASVELPINVVNEDRALTMLGGPEKVARAIKNSDKLELRFRPEDHFAHP
VNSVLSNDQHVLLEVKLSKKLLEKHNGDVRAALKAQEQETGKSSDYKCHHISSTQRFREM
ADFQWCTKNSPFVHKVEASLFAGDLQRIKELELEGPGDLTSVEIDSIPPPRFSLIHYPFP
YYYKQNPMVTVVKDGSSTKLVNANAAPKLYSWVLTATDPAPTGPRKELAPLPEPDAEMDT
SNGDARRDYSGKPAQQVHEKLLRQCVDELQELFRERPLWTRQGLRHYVNNPELKHILRFA
LPYVAYYFRSGPWRGAYVVYGKDPRTDPSMRFYQTEAFRISDNQDEKTEKVEDDLAGLAP
PVQPAAQKALPLPYVFDGIHPPESQTLQLCDITDPLLYEKIHSAPVRAKYDVLDGWFEYN
DISKIRKALRAKVRGTILRENSDETVQAIFDAEEEQRPEGDVEENQVAEDDEEDVVEVVD
PEMQPETTEAAVITESSSEPPVEDPDLNMFSLHLNNVKSLRDLSGISQQRIDDKDKDKDT
GKDEGKDEGKGEGKGEGKGEGKDEDKEW*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG