YALI0E13640g

Overview

Description weakly similar to uniprot|P46962 Saccharomyces cerevisiae YJL006c CTK2 carboxy-terminal domain (CTD) kinase beta subunit
Locus type CDS
Locus tag YALI0E13640g

Location

Species Yarrowia lipolytica Positions 1652473..1653467
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 995 (nuc.)
Previous locus YALI0E13618g Next locus YALI0E13662g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E13640g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E13640gYALI0E13640g_mRNA-001YALI0E13640g_CDS-001

Nucleotide sequence

 

>YALI0E13640g
ATGGCCACAGCGTCGCCATATCCATCCGACATCATCATGTCCAAGCCGTATCTCAGCGAA
AACGCCATCCAGCAGATCCAGGCTCATTCCGTCTACACCACCTATTCTCGGTACATGGCC
CAGGCCAACATCGCATTCAAAGTGCTTGAGGCGACATGCAAGAGCCTGCTGCTGCCCGTG
CGCTCGTTCGGAACGGCCATGGTACTCTTTTCGCGCTACTGTCTGCTCAACAACTCGTTG
GACGGCACTTTCGAGGAGGTCCTCATTGCCTGTCTTGTTTGCGCCTGCAAAATCGAAGAT
ACCGCCAAACGGGTGCGAGATGTGCATGGCGCCGTATACTTGTACTCAAAGGTGGCCATG
GTGGCCTTTGATGCGTGCAAACCCAAGATCATGACGCTAGAGCTTCAGATTCTGGAGACG
GTCACCTTTGACTTCCGAATCAGACACCCCCAACCATACATCATCAAGATCGCCAAGGCG
CTGGGAGCCTCCAAGGAGATAGCGCGCCTCGCATGGACCATTTCCATGGACACATACAGA
ACACACATGCATATGAAGCGTCCTCCACACACTATCGCACTGTCGTGTTTGATACTGGCT
GGCAAGCTGAAGAACGAGACAAACATCTTCCCCATCAAGTCGGAACCATATAACTCGGAT
CGTTTGTCGGTGAATCATGCGCTTTTGGACCTCTTGGATCTCTACATGATCTACCTGGAC
AGCACCAAGCTGGGCGAACACAAGTACGAAAAGAGCGTGTTTTCACAACTACGAATTGCC
GTGTCAAAGGAGGTGGAAAACTCACATGTGGAGGAACATACGCTGAGTCACGAACAAGAA
CAAGCCATTTCAAAGCAACTTATTCGGGACAAAACTCGTTCTGATAAGGGAACCGTTCGG
TATATTCTTGATTGGGAAATTCATCAGCTAGGAAAGTATGAGGAGGTTAATTAGCATGCC
GGTATGTACGATTGTAATCACATTGGTCGATATTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E13640g_CDS-001

Protein length: 318 aa.
Product: Conserved hypothetical protein

>YALI0E13640g_CDS-001 MATASPYPSDIIMSKPYLSENAIQQIQAHSVYTTYSRYMAQANIAFKVLEATCKSLLLPV
RSFGTAMVLFSRYCLLNNSLDGTFEEVLIACLVCACKIEDTAKRVRDVHGAVYLYSKVAM
VAFDACKPKIMTLELQILETVTFDFRIRHPQPYIIKIAKALGASKEIARLAWTISMDTYR
THMHMKRPPHTIALSCLILAGKLKNETNIFPIKSEPYNSDRLSVNHALLDLLDLYMIYLD
STKLGEHKYEKSVFSQLRIAVSKEVENSHVEEHTLSHEQEQAISKQLIRDKTRSDKGTVR
YILDWEIHQLGKYEEVN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG