YALI0E13255g - SSE1

Overview

Description uniprot|Q6C618 Yarrowia lipolytica YALI0E13255g SSE1 HSP70 protein, ATPase component of heat shock protein Hsp90 chaperone complex
Locus type CDS
Gene name SSE1
Locus tag YALI0E13255g

Location

Species Yarrowia lipolytica Positions 1595877..1597974
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 2098 (nuc.)
Previous locus YALI0E13233g Next locus YALI0E13277g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E13255g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E13255gYALI0E13255g_mRNA-001YALI0E13255g_CDS-001

Nucleotide sequence

 

>YALI0E13255g
ATGACCACCCCCATTGGATTGGATTTTGGTAACTACCACTCCTACGTCTGCGCCGCCCAG
CGAGGCAACCTCGACGTTCTCGCCAACGAGGTGTCCAACCGAAGCACACCCTCTCTTGTT
GGTTTCTCCTTCAAGAACCGATACCTTGGAGAGACCGCAAAGTCCAACGAGGTGTCCAAC
CTGAAGAACACCGTTGGTTCTCTGCAGCGAATCATTGGCCGAGCCGGCGATGATCCCGAG
TTCCTTGCCCAGCAGAAGTTTGTCTCTTCCAAGCTGCTCCCCGTCGACGGCCAGGCCGGT
GCCGAGGTCACCTACAAGGGTGAGAAGCGACAGTTCACCGCCACCCAGCTCACCGGTATG
TACCTCAACAAGATCAAGCAGACCGCCATCACCGAGACCAAGTCCCAGGTCTCCGATATC
TGCATTGCTGTTCCCGTTTGGTTCAACGAGCAGCAGCGACTTGCCATCAAGGACGCTGCT
GCCATTGCCGGTCTTAACTGCGTCCGAGTGGCCAACGACGTGACCGCCGCCGCTGTCGGA
TGGGGTGTTTTCAAGAACAATGATCTGCCCGTTGACAAGCCCAAGCTTGTCTGCTTCGTC
GACGTTGGACACTCCTCTTACACCGTGTCCGTCGTTGCCTTCAAGAAGGGAGAGTGCAAG
GTCCTGGGTACCGCCTACGACCAGCACTTTGGTGGCCGAGACTTTGATGCTCTGATTGCT
CAGCACTTTGCCGAGATCTTCAAGAAGAAGTACAAGATCGACGTCAACACCAACCCCAAG
GCTGCTGCCCGAGTCATGGCCCAGTCCGAGCGACTCAAGAAGATTCTGTCTGCCAACTCT
TCTGCTCCCTTTAACATTGAGTCCGTCATGAACGACGTTGATGTCTCTTCCTCCATGACC
CGAGAGGAGCTCGAGGAGGCTGCTGCCCCTCTTCTCAAGCGAGCCCACATTCCCGTCGAG
GAGGCTCTTAAGCGAGCCGGTGTCACCCCCGATCAGCTCGACAACATTGAGGTCATTGGT
GGTTCTTCTCGAATCCCCTCTGTCAAGGAGGTCCTGTCCAAGGTCTTCAACAAGCCTCTG
TCTTACACTGCCAACGCCGAGGAGTCCACCGCTCGAGGTGCCGCCTTCATCTGTGCCATG
CACTCCCCCACCATGCGAGTCCGACCCTTCAAGTTTGAGGACTACAACCTCAACTCCGTC
ACCTACTCGTGGAACCCCGTTGAGGGCGAGGATGTCTCTGAGCTCGAGGTCTTCCCCGAG
GGAGGCTACTACCCCAACACCAAGGTCATCACTCTTCACCGAGCTGCTGCCTTTGATGTT
ACTGCCCGATACACCAACCCCGACACTCTGCCCGAGGGAACCAACCAGTTCATCTGCAAG
TGGACCATCTCCGGCATGCAGGGCAAGGAGCCCGCTGTCTGCAAGCTCAAGCTGCGACAG
GACCCCTCCGGCATCTTCACCATTGAGGACGCTTACGTTGCCGAGGAGGTTGAGGTTGAG
GAGCCCATTGAGGGAGCCGAGCCCGCTGAGGAGGGCGGAGAGATCCCCACTCAGACTGTT
AAGAAGTGGGTCAAGAAGACCGACCTCAAGATCGAGGCCCAGGGCCTGGGTCTGTCTCAG
AAGCAGCTGCAGGAGCAGATTGAGCTGGAGAACTCCATGATCATGGAGGACAAGCTCGTT
GCTGACACCGAGGACCGAAAGAACGCCCTCGAGGAGTACATTTACGAGATGCGAGGCAAG
CTGGAGGACATTTACGCTGACTTTGCCTCCGACGCCGAGAAGGCCAACCTCCGAGAGAAG
ATGGAGAAGATTGAGGACTGGCTCTACGGTGCCGGTGAGGACGCCAAGAAGGCTCTTTAC
ATTGCCAAGTACGAGGAGCTGGCTTCCATCGGAAACCTCATCAAGGGCCGATACAACGCC
AAGCAGGAGGAGGAGCGACAGGCCAAGGTTGCCAAGAAGGAGGCTGCCAACCAGGCCAAG
CTTGCTGAGATGATGGCTGCCAAGCGAAAGGAGAAGAAGGATGCCGATGGCGATGTCGAG
GTTCCCGACGTCGAGTAAATTAAAATCGTATAGAAATATTAGATGATAAGGAAGACCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E13255g_CDS-001

Protein length: 686 aa.
Product: HSP70 protein, ATPase component of heat shock protein Hsp90 chaperone complex
Gene: SSE1

>YALI0E13255g_CDS-001 MTTPIGLDFGNYHSYVCAAQRGNLDVLANEVSNRSTPSLVGFSFKNRYLGETAKSNEVSN
LKNTVGSLQRIIGRAGDDPEFLAQQKFVSSKLLPVDGQAGAEVTYKGEKRQFTATQLTGM
YLNKIKQTAITETKSQVSDICIAVPVWFNEQQRLAIKDAAAIAGLNCVRVANDVTAAAVG
WGVFKNNDLPVDKPKLVCFVDVGHSSYTVSVVAFKKGECKVLGTAYDQHFGGRDFDALIA
QHFAEIFKKKYKIDVNTNPKAAARVMAQSERLKKILSANSSAPFNIESVMNDVDVSSSMT
REELEEAAAPLLKRAHIPVEEALKRAGVTPDQLDNIEVIGGSSRIPSVKEVLSKVFNKPL
SYTANAEESTARGAAFICAMHSPTMRVRPFKFEDYNLNSVTYSWNPVEGEDVSELEVFPE
GGYYPNTKVITLHRAAAFDVTARYTNPDTLPEGTNQFICKWTISGMQGKEPAVCKLKLRQ
DPSGIFTIEDAYVAEEVEVEEPIEGAEPAEEGGEIPTQTVKKWVKKTDLKIEAQGLGLSQ
KQLQEQIELENSMIMEDKLVADTEDRKNALEEYIYEMRGKLEDIYADFASDAEKANLREK
MEKIEDWLYGAGEDAKKALYIAKYEELASIGNLIKGRYNAKQEEERQAKVAKKEAANQAK
LAEMMAAKRKEKKDADGDVEVPDVE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG