YALI0E13035g

Overview

Description similar to uniprot|Q09184 Schizosaccharomyces pombe SPAC23H4.09 curved DNA-binding protein (42 kDa protein)
Locus type CDS
Locus tag YALI0E13035g

Location

Species Yarrowia lipolytica Positions 1573212..1574534
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1323 (nuc.)
Previous locus YALI0E12991g Next locus YALI0E13057g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E13035g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E13035gYALI0E13035g_mRNA-001YALI0E13035g_CDS-001

Nucleotide sequence

 

>YALI0E13035g
ATGGCCCCCAAGACTGACGGTGAGTGAATTGAGCGGCTGCGCGACCGTTGAACCCCCAAC
TAACACAGTTAACACCACCCTCGCCAACTCCGAGGTTGTCTACAAGTACCGAACCGCCGG
CGAGATCTCCGCCAAGGTTCTTGAGCAGGTCAAGGCCCTCTGTGTCGACGGCGCCAACCT
CTACGACATCTGTGTCAAGGGTGACGAGCTCCTCGTCGCTGAGACCAACAAGATCTTCAA
GGGCAAGAAGGTGACCAAGGGTGTTGCTTTCCCCACCGCCATCTCCCCCAACAACTGTGT
TGCCCATCTGTCTCCCATCTCCACTGATCCCGAGGCCAAGATCAACCTCAAGACCGGCGA
CGTCATCAAGGTGTCTCTCGGCGCCCAGATTGACGGCTACGGCGGTGTTGTTGCCGACAC
TCTCGTTGTCTCTGGCGGCCCCATTGCCGAGGGCCCCATCACCGGCAAGGTTGCCGATGT
CATCTCTGCCGCCTGGTACGCTACCGAGGTCGCTGTCCGAACCATCAAGCCCGGCAACAA
GAACTGGGACGTGACCCGAAACGTCGAGGAGGTCTGCAAGGCCTACGGCTGCACCCCCGC
CGAGGGTATGCTGACCCACCAGCAGGGCCAGAACATTCTGGATGGTAAGAAGCAGATCAT
TCTCAACCCCACCGAGGGCCAGAAGCAGAACTTCGAGACCTTCACCTTTGAGGCTGATGA
GGTCTACGGACTCGACATTCTTGTCTCCACCGGCGACGGTAAGGTCAAGCAGGGCGAGAC
CCGAACCACCATCTACAAGAAGACCGATCTGACCTACCAGCTCAAGATGCGATCTTCTCG
AGCCGTTTTCTCTGAGGTCCAGAAGAAGGCCGGAGCCTTCCCCTTCTCCGTCCGAGTCCT
TGAGGACCCCACCAAGGGCCGAATGGGTCTCCAGGAGTGCAAGAACCACGGTCTCGTCAT
CCCCTACGACGTCCACTACGAGAAGGACGGCGAGATTGTTGCCGAGTTCTTCACCACCGT
CGGTGTCACCAAGGACGGTAACATCAAGCTGGCCACCGCCCCTCAGCCCGACTTCTCCAT
CGTCAAGTCTGACAAGAAGATTGAGAACGAGGATCTCCTCAAGGTTCTCGCTGAGCCCCT
CAAGCTCTCCAAGAAGGAGCGAAAGGCCCAGGAGGCTGCTTCTGCTTAAATCACGTTAAA
TAGGCAGAATAGGATGTATACCGGTTAGTATGAAAATATGATTGCGATGATGACATGGTA
ATATCCGATGGTACGAGTACTTGTAATGGAGTGTAGGAAGGTGTAATGGAAAGAGGATAG
TGC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E13035g_CDS-001

Protein length: 380 aa.
Product: Curved DNA-binding protein, putative

>YALI0E13035g_CDS-001 MAPKTDVNTTLANSEVVYKYRTAGEISAKVLEQVKALCVDGANLYDICVKGDELLVAETN
KIFKGKKVTKGVAFPTAISPNNCVAHLSPISTDPEAKINLKTGDVIKVSLGAQIDGYGGV
VADTLVVSGGPIAEGPITGKVADVISAAWYATEVAVRTIKPGNKNWDVTRNVEEVCKAYG
CTPAEGMLTHQQGQNILDGKKQIILNPTEGQKQNFETFTFEADEVYGLDILVSTGDGKVK
QGETRTTIYKKTDLTYQLKMRSSRAVFSEVQKKAGAFPFSVRVLEDPTKGRMGLQECKNH
GLVIPYDVHYEKDGEIVAEFFTTVGVTKDGNIKLATAPQPDFSIVKSDKKIENEDLLKVL
AEPLKLSKKERKAQEAASA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG