YALI0E12991g

Overview

Description some similarities with uniprot|Q04779 Saccharomyces cerevisiae YMR075W Transcriptional regulatory protein RCO1
Locus type CDS
Locus tag YALI0E12991g

Location

Species Yarrowia lipolytica Positions 1568261..1570930
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 2670 (nuc.)
Previous locus YALI0E12969g Next locus YALI0E13035g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E12991g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E12991gYALI0E12991g_mRNA-001YALI0E12991g_CDS-001

Nucleotide sequence

 

>YALI0E12991g
ATGCCCGAGTGGACCGAGCCACAGACGGCAGGCCCGCAGAACTCCGTGACCGGGTACAAC
TTTGGCGCTCCACCGCCGAAAAAGTCGGGACGAGGACGCAAGAAAACCGTCAAGCGCATG
AGTCGCGCCTCGTCGGTGGCTTCGTCAGAGTCCAGTCCGGCGCCCGAGTCCACGAACGGT
GTTAATGGACACGAGCCCAACGGCAATACCACAGACAGCACGCGTCCGTCGTCGCCATCA
TCGTCACCGCAGGTGGAAGACCGGGTGCAGCAGTATGAGTCCACCAACAAGAGATCACTC
AAGGTGGCTCTGGACAAGACAGAGCCGTCCACAGAACGAGGCTCGCTCAAACGACAAAAG
ACTGCGACGCCAAGCGGTTCCAGTACGCCGAGGAAACGAGGAAGACCCAAGGGATCAGCA
AAGAAGGATAAGAGCAGTACTCCGACCCCGAGTACTCCAAAGCTGGGATCCACTCCGAAC
CTGGGACACGGTTCGGGTCTGCATATTAAGATCAAGGTGGCCAGGTGAGTACATGAGTGC
AACTCCAATTACGCGAATTGTTCGCCATCGTGTTACATATTGATACCCATGAGAGAGTGT
TGTTAAGACACAGAGCGAGAGAGAGAGAGAAAGAAAGAGAGGTGGAAAGTGACGGCTTAC
ATGATCTTCAATGTTACAATGCTGACGCGGTTACTACAATCAAAGTATGTTGTTGGTAAT
GACATGTCGTTGTCATGGTCGTGTCGTCATTGCTTACATGCTGCGATGTTATGCTCGCAA
ATTGCGTTTGCTTTCATCTATTGCGGTTTGACACATAAACAGATTGTTGTGGTGGATACC
CTGTGATACCCATACCCCACACGCCCAGATTTTTTGGCCGCCCGTTTGCCTCGCCCCCCC
TCTTGCTGTCTACCGAACAGCTCTCGCTGTTCGACTTCCTTTTTCTCCGCTAACTCAGTC
CCAAAAAGCCCGGAAGTCCGTTTGGATTTGCGACTAAAACGCCGCCAAGAGTCGCGGCTC
CCCCTAGTGAAGACGACCCGACCAAGGTGAGTATTGTTGGATTGGTAACTATATTGAAAC
ATGCTGGAAGTGATCATGCGAATATTTCTGTTGCATGATTGCTGTCAATGTACCTGTCCT
CTGACACGTTTCTGTCAAGACACATTGTTGGTTTTTTTGGTGGTGGTGTGTTCTTGGAAG
TTATGTTGGCTTGACTTTGTTGAGTCCAGCAAGGTTAGCACACATAACCATCTGACGAGC
TGACACGAACCTCACTCTATTATTATATAGAGCGGGGATATGTCTCGTGTGTTGCACCAC
CACATCTTTTTTCCCTGGATACCGTGTCATTGAGTCTATTTCACAACCGTCCACAAGTAT
CCCCCGTAACCTAATATCTAACCCCAGGACAATGACGATTTCTGCGACGCGTGCAAGGGC
CTAGGCCGGTTCCTCTGCTGCGAGGCATGTCCGAAATCTTTCCATTTTGCATGTTCCGAC
CCGCCTTACGATGACGAGTCGCTTCCCGACGGCCAGTGGTTTTGCAAGGAATGCAAGGCC
CGCCGGTTCCCTCCGGAGCAGGCTCCCAGGGGCATTTTTTCGCAATTACTAAACCGCATC
AGTCGCACCAACCCCAAGGAGTTCCGTCTTCCCAAAAGCATCCGCGAATACTTTGAGGGT
GTCAGCACAGGGCCGTTTGGCGAGTATTCCGACGACCACGAAAAGACCGAGAAGGATATC
ACGCTGGCTCTGGATGATCGAGAGGTCGGCATCGTTCGCAACCTGGATAAGAACGGCAAG
CCGCTCGAATGCTTCAAGTGCGGCAAGAACGGTCTCAATGGCCGAGGAATCACATCCTGT
GATTACTGCCCCACAGCATGGCATCTGGACTGCATTGATCCTCCGTTGGCTAATGTCAAG
ATGCTAGGCCGAAAGTGGAAGTGTCCTAATCACGTGGATAATGTGATTAATCTGCCTCGA
AAGCCCAAGAAACTGAAACGTATTGATACGGACCTCCAGCGAGGGTTTGTTAACGATGGT
AACATAGAGGTTCTCCTTGATGAGGGAGATGAGGGGGTACCCCTCTCTATAAAGCCGTCG
CTAGCTGATATTCGTCGGGCCAAAATGAGGGAAATGGTGATTGATGGAGTGGCTTATCGA
CTGCCAGAAGCAGGGATCAAATTGGACTTCATCGACACAGTAAAAATGCATAATTGGAAC
GAGGCTAGAGATGAAGCCGTGGCAGCATACGCCATGTTGGACATGGCCGAGAAGTACAAG
GAGATGGAGGTGAAGATGGAGGAAGAAGACGATGACGATGATGGTGAGATTAGTGACGGA
GGTCCCGACGATCTGGAGGCGGGTGTGGAGCAGGACGAGGAACAGGACTTGTTCTCGTTA
TCCGAAAAACATCTGCTGGCTGAAGTGAGAAAGATTGTCACCAGCAAGGGCTTGGATGCC
GTGTTGGCGGAGTTGAAGATAGCCGATCTGGTGGAGAAGAAGATCAAGGAGGAGCAAAAT
GATAATGTGAAAAGTGAGACTCGTGACTGATCTCCGCCGGAACTCTTTTCTGATCCCCTA
CCGACCTCTTCTGACGACTATGCTGTAACTGATATGACTACCAAAGTTAGGTATTTTGTA
CAATAGACATTAATTTATATCTGTTTGTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E12991g_CDS-001

Protein length: 585 aa.
Product: Conserved hypothetical protein

>YALI0E12991g_CDS-001 MPEWTEPQTAGPQNSVTGYNFGAPPPKKSGRGRKKTVKRMSRASSVASSESSPAPESTNG
VNGHEPNGNTTDSTRPSSPSSSPQVEDRVQQYESTNKRSLKVALDKTEPSTERGSLKRQK
TATPSGSSTPRKRGRPKGSAKKDKSSTPTPSTPKLGSTPNLGHGSGLHIKIKVASPKKPG
SPFGFATKTPPRVAAPPSEDDPTKDNDDFCDACKGLGRFLCCEACPKSFHFACSDPPYDD
ESLPDGQWFCKECKARRFPPEQAPRGIFSQLLNRISRTNPKEFRLPKSIREYFEGVSTGP
FGEYSDDHEKTEKDITLALDDREVGIVRNLDKNGKPLECFKCGKNGLNGRGITSCDYCPT
AWHLDCIDPPLANVKMLGRKWKCPNHVDNVINLPRKPKKLKRIDTDLQRGFVNDGNIEVL
LDEGDEGVPLSIKPSLADIRRAKMREMVIDGVAYRLPEAGIKLDFIDTVKMHNWNEARDE
AVAAYAMLDMAEKYKEMEVKMEEEDDDDDGEISDGGPDDLEAGVEQDEEQDLFSLSEKHL
LAEVRKIVTSKGLDAVLAELKIADLVEKKIKEEQNDNVKSETRD*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG