YALI0E12969g

Overview

Description similar to uniprot|O94076 Emericella nidulans BIMD protein
Locus type CDS
Locus tag YALI0E12969g

Location

Species Yarrowia lipolytica Positions 1564532..1568174
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 3643 (nuc.)
Previous locus YALI0E12947g Next locus YALI0E12991g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E12969g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E12969gYALI0E12969g_mRNA-001YALI0E12969g_CDS-001

Nucleotide sequence

 

>YALI0E12969g
ATGACGGCCAAGGCGCGATTGAAGACGACGAATCTCCTAAAGGGAGACACGGGCGCCATC
AAGAACAACGTCAAGGTGAGTATCTATCCTTTTCTATCTTCTACGACATTCCAATTGTGT
GGTTTGCTAACCTAGAAACTGCTGGACGAGCTGAGAAGTGTCGAACAGGGAGGCCTGGAC
ATCAATGCCTGCAAACCTATCCGGCAGGCGCTTCTGGACAAGCGCATTCTCGAATCCAAA
GATCAGACGACCCAGGCGTACGCCTCGCTGTGTTTCCTGGAACTCCTGAAAATCTTTGCT
CCGGATGCCCCTCTTTCCATCTCCGACCTGGAGCGCGTGTTTCAGCTGTTCAAGCGCCGG
TTCAAGGCACTGGCCAACACCGAGGCCGCTAGCTACGCCGAAAGCTTTGAACTGCTTGAA
AACGTCGAGTCTCTGAACTGCATTGTTCTGGCGAACGACTTTGAAACCAGAGATAAGTTC
ATTGACGATCTGTTTTTGCTCTTCTACAAGCTGTACACCACAAAGCCCGACAGCAAACAC
GCCGTACTACTTCCCCGTGTACTTAATCAGCTTCTTTACGAAATCAACCAGGAGGGCAAT
TTGCCCATGCAGTCTGCTCGAGTGGTCTTCTCTCAGTTTGTGGCTGTCCCCAAGAAGAAG
ACTGCGTCCAAGCAGGCCTCTCTGGGCTTTGAGAATGCTGGATACGCGCTGAGCAAGATT
CTGTGCGCCGATAACAAGACGGTCATGGCCAAATCTTTGTTTGCGTATTTCAACGACGTG
TTCAACAGCGAGTGTGGAGACGACGCAGAGGAGGACGAAGAGACCAAAATGACGGAGCTC
ACTCGATTACACAAATTGGTGGTGGAGATCTGGAAGGCCGTTCCCGAAACCATTGCCCAG
CTGGTCGGATATTTGCAAGCTGAACTCATCACCGAAAAGACAGCCGTGAGATTGCTGCTG
GTAGAGGTTGTGGGAGACATGATTGCGCACCAGCCTTCAGAGATCAACTTTGTGACCACC
TACGATACCTGCTGGAATCTGTGGCGAGATCGATGTCGCGATAAGGATCCCGAAGTGCGT
GAAATGTGGGCTTTCAAGGCCCATGATATTCTCAAGTATCGAACTGACGTGACTCGAGAG
GTTTCCAAGATCCTTCTGCAGCTGTTGATTGACGAAGATGAGAGAGTTCGAATCCAGGCC
ATCAAGTCTCTGGGTGAACTGGAGCCGGAGACGCTCAAGAACCTCGTGGGAGGCTCAGAC
GAATTCATCAAGCTCATGACTGACCGTATGGGCGACAGGAAGCCTCTTGTGAGAAAAACA
GCCACAGAAGTGTGTGCTCAACTATATGCTGATGCATACCCCCTGATTGAGCAAGATGAG
GATGTGTCCAGTATTGCCAATTGGATCCCCAGTGCTCTTCTGAACTTGGTGTTCAAGAAC
AACCCCGAAATCACCTTCAACATGGAACGGGTTTTCCATGAGGATATCTTGACACGAGAA
ACTGGTGTTCAGACTCGTGTGGAGCGTCTTTTGTCGGTGTTGGGATCTCTTGGTGATGAT
ACTTCTCCTGCCAGAAAGTCGTTCCATTCACTTATCAACTGGCAAAACACCATTTCTGAG
TACTTCAAGGCGGCTGTGGGGGATGTCATCACCGATGCTCAAAAAGAGTCTATTATCGAG
TGGATGGCCAATATCACACCTAACCCCAAGCTTGCAAGTTCTGCCATCGCTGAGCTTCTG
GAAAACTATAGTGAAGACCTCAAGACATGTATTTCACCCGACTCGACTGTGCGAGAGGTG
ATTGAGGCACAGGATCGAATTCTTGACGAGTTCTCTGGAGAAGCCGCGGAAGTTATTGCT
GTGCTTCTCTATCGAAGCTCCAACTTGCTCCTCAACAAGCAGATTCTCGCATCTCTGGTC
ACCCAGCCCGTGGCTGCTTCTTTCTTGGAGCACGTGTCTAGAATCAACCCAGCCCTTCTC
ACAGCCCATGTCAACGGCATGTTCGAGTCCATTGTTGCCGAGAATGCCTCTGAAGAAACT
CTTCGAACCCTGGCAGCTATGGCCAAGCGGGGCAACAATACTCTCAAGGTTCCTAAGATG
GCATTCAAGCCTCTGACAAAGTTAATTCTTGACGGTGAGCCTCTAGAGGCCAACTATGCT
ACCGCCATTGCCTGCTGTGCTGCCCCTTCACTTCTTTCAGCTTCGGCTATCAAGGCTCTG
GTTGGTTCTGCTAACACTGATTCCAAGTACACTGCGTTGACGCAAATCTACAAGCGAAAG
CCTGAGCTTCTAGAGAAACATGACCTAACAGAACACGTTTCTGACTTGCTAGCAAATATG
GAGGACCCCGACACTGAGGTGTCTGGCTTCGCGGTATCGTTTGCAATCACCCACGAGACT
GCTAAGGGTGCCCCTAACCTTGTTGACACCATCTGCAACCTCATTGACCCCAAGGATCTA
GAAATCGACGAAGATGGGGAGATGGTTGACAACGAGCTATCTCCTTCTGTTCATCTGTGT
CTTTCTCTGGAGCTTCTACGGCTTGCTTGGAACCCGGCATACAGAGCTGACAAGATTCAT
GCCCAGCACATCATTTCTCTGTCTCGAACAGTTCGACATCCTGATCCCGAAGTTCGAAAA
CGGTTCATGCAGAAACTCATGTCTCTGATGAACAAGAACAAGCTAGGCTGGAAGTTCCTT
CTTTTGCCGCTGCTGTGCATCGGAGTGGAGTCTGAAGCTGCTTTTAAGGATGATGTTGTC
CGATGGGTGCGTGCCAAGCACGACAATGAGCTCAAACAAAATCCCAAGTCCACCGTTTTT
GTGGCTCTGTTCCCACGTCTTTTGCACTTTCTTGGACGTGATCTCATCATTCACACTGGA
GGAGCCGTCACTGGCGATCATCTAGAGGAGCCGTTGTATGCCATTCTGGTCTTTCTACAG
ATTGTGGCAGATACAGACAATTTGGCCATGCTGTTTCATCTTGCTCAGCGGGTCAAGCAA
TTCCAAGATGCTGTAGACGAGGAGCGAGCCAACATTATGCATCTGGACAAGGGCGTCCAT
TTTCTGTCTGAGCTGGCACAGCTGTCCATTCGTCAGTATGCTGAGAACAAGCACAACATG
CAGATACCCACCTATCCTGGCAAAGCAAATATGCCTGGCGATATCTTCAAGCCGTTCGAT
ACCCCCGAACTGGCTAAAAAGGCGTCTCAGACGACGTACATGCCTCAGGAGGTGGCCGAG
GAGATTCCCCACAGTATCCGAGTGTTCTTGACGTCTCGAAAACGTGCTCAGGAGGCTAAT
GCAGAGAAAGCCAAGAAGCCCAAGAAGGCCAAGACCATCAAAGCACCCAAGAAGACGAAA
AAGGCTGCCAGTAAACCAAAGGCCAAGAAGAAAGCCGCTGGGACTGAAGACGGACCACGA
AGGCGAAGCAGTCGACATTCTGGACGAGTGAGTGACTACAGAGAGAAGTCTGTTGAGGAG
TTGGAAGAAGAAGATGAAAGTGAGGACGAAGAGGGCGACGAAGAAGAGGAGAGTGAAGAG
GAGGAGGAGGAGGAGGAGGAGGGAGAGGAGGAAGAAGAGGAAGAAGAAGACGATGAATAA
CTGTATGTATTGTATTTTAATGTTATATCAGAATTAGCCGAGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E12969g_CDS-001

Protein length: 1180 aa.
Product: Conserved hypothetical protein

>YALI0E12969g_CDS-001 MTAKARLKTTNLLKGDTGAIKNNVKKLLDELRSVEQGGLDINACKPIRQALLDKRILESK
DQTTQAYASLCFLELLKIFAPDAPLSISDLERVFQLFKRRFKALANTEAASYAESFELLE
NVESLNCIVLANDFETRDKFIDDLFLLFYKLYTTKPDSKHAVLLPRVLNQLLYEINQEGN
LPMQSARVVFSQFVAVPKKKTASKQASLGFENAGYALSKILCADNKTVMAKSLFAYFNDV
FNSECGDDAEEDEETKMTELTRLHKLVVEIWKAVPETIAQLVGYLQAELITEKTAVRLLL
VEVVGDMIAHQPSEINFVTTYDTCWNLWRDRCRDKDPEVREMWAFKAHDILKYRTDVTRE
VSKILLQLLIDEDERVRIQAIKSLGELEPETLKNLVGGSDEFIKLMTDRMGDRKPLVRKT
ATEVCAQLYADAYPLIEQDEDVSSIANWIPSALLNLVFKNNPEITFNMERVFHEDILTRE
TGVQTRVERLLSVLGSLGDDTSPARKSFHSLINWQNTISEYFKAAVGDVITDAQKESIIE
WMANITPNPKLASSAIAELLENYSEDLKTCISPDSTVREVIEAQDRILDEFSGEAAEVIA
VLLYRSSNLLLNKQILASLVTQPVAASFLEHVSRINPALLTAHVNGMFESIVAENASEET
LRTLAAMAKRGNNTLKVPKMAFKPLTKLILDGEPLEANYATAIACCAAPSLLSASAIKAL
VGSANTDSKYTALTQIYKRKPELLEKHDLTEHVSDLLANMEDPDTEVSGFAVSFAITHET
AKGAPNLVDTICNLIDPKDLEIDEDGEMVDNELSPSVHLCLSLELLRLAWNPAYRADKIH
AQHIISLSRTVRHPDPEVRKRFMQKLMSLMNKNKLGWKFLLLPLLCIGVESEAAFKDDVV
RWVRAKHDNELKQNPKSTVFVALFPRLLHFLGRDLIIHTGGAVTGDHLEEPLYAILVFLQ
IVADTDNLAMLFHLAQRVKQFQDAVDEERANIMHLDKGVHFLSELAQLSIRQYAENKHNM
QIPTYPGKANMPGDIFKPFDTPELAKKASQTTYMPQEVAEEIPHSIRVFLTSRKRAQEAN
AEKAKKPKKAKTIKAPKKTKKAASKPKAKKKAAGTEDGPRRRSSRHSGRVSDYREKSVEE
LEEEDESEDEEGDEEEESEEEEEEEEEGEEEEEEEEDDE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG