YALI0E12837g

Overview

Description similar to uniprot|Q96VC8 Yarrowia lipolytica YALI0C23617g GPR1 Glyoxylate pathway regulator
Locus type CDS
Locus tag YALI0E12837g

Location

Species Yarrowia lipolytica Positions 1555267..1556088
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 822 (nuc.)
Previous locus YALI0E12815g Next locus YALI0E12859g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E12837g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E12837gYALI0E12837g_mRNA-001YALI0E12837g_CDS-001

Nucleotide sequence

 

>YALI0E12837g
ATGACTACCCTCAACAACTCTTCTCATGCAATGGCCAGCGACCTTGATCTCGAACGGGGT
GGTTCTACTGACAGAATCTCTCATGTCGAGAATGGCAAGGATGGCCGTGTCCTTGAAAAC
GGAGAGTATCTCATCATCGCCGGTACTCGATACCACAGGAACGAGTTCATGCAGGCGTTT
GGAGGTACTCTGAACCCTGGATCCGCCCCTGCTCCCTCTAGAAAATTTGGAAATGCTGCT
CCCATCGGTCTGTTTGCCTTCTCCGTGACAATGATCATTCTTGGCTTCTGCACCTGTGGA
GTCCGAGGTATTGGAGCTCCTAATGTCATGGTTGGATGCGCCATCTTCGGTGGAGGTCTC
TGTGAACTCATTGCCGGTATCTGGGAAATTGTCGCCGAAAACACCTTTGCGGCCTGTGTC
TTCCTCTGTTTCTCCTGCTTCTGGTTCTCTTGGGCCATGCTCAACTTACCTATTGGAATC
GAAAAGTACTACGCCACAGAAGATGAGTTTGCCCAAGCTGTTGGAGTCTTCCTCATGGGC
TGGTTTGTCTTCTGTGTACTGATGACACTGTGTACACTGAAGGCGACGGTTGCCTTTTTC
GTCATGTTTGTGTCTCTGGACCTCGCGGTCATCTTCCTAGCTGCTGGTAACTTCACTGGA
AATCCCCGTCTGCTCGTTGCTGGTGGTTCTTTCTGCATTTCCACCGGTCTCCTGGGCTGC
TGGAACGCAATGGCTGGTGTTGCAACTCCTCAATCCACTTACAAGTGGTTCATTCCCGTT
CCCATCATGATGCCTGGTGCCCACAAGCCAAAGATGACTTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E12837g_CDS-001

Protein length: 274 aa.
Product: Protein of the GPR1/FUN34/yaaH family

>YALI0E12837g_CDS-001 MTTLNNSSHAMASDLDLERGGSTDRISHVENGKDGRVLENGEYLIIAGTRYHRNEFMQAF
GGTLNPGSAPAPSRKFGNAAPIGLFAFSVTMIILGFCTCGVRGIGAPNVMVGCAIFGGGL
CELIAGIWEIVAENTFAACVFLCFSCFWFSWAMLNLPIGIEKYYATEDEFAQAVGVFLMG
WFVFCVLMTLCTLKATVAFFVMFVSLDLAVIFLAAGNFTGNPRLLVAGGSFCISTGLLGC
WNAMAGVATPQSTYKWFIPVPIMMPGAHKPKMT*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG