YALI0E12815g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0E12815g

Location

Species Yarrowia lipolytica Positions 1553168..1555229
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 2062 (nuc.)
Previous locus YALI0E12795r Next locus YALI0E12837g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E12815g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E12815gYALI0E12815g_mRNA-001YALI0E12815g_CDS-001

Nucleotide sequence

 

>YALI0E12815g
ATGACCAACATCCCCAATCCATGTTTGTTGGCGATTCTGGTCACGTGCGCGACCTCGACC
GGACCGCAGTTTGTGTTTCATTACCCGCCCAAGCCCAAGTCCTACGGGTATCGAGCTGCA
GCACCGGTAATCTTCCGCGAGAACGAGGAGTCTTCAGGTGATAGTGAGTCTTCGGAAGAC
GACCTTGGCGACATTCTGTCCGACTCCGACGAGAGCGACAAGGAGGAAGAGGAAGCTCCT
GCTCTGGATTATCGGCGATTGAACAAACGGGATCAGGGCAAGAAGGAGAACCGACGACGA
AGAAAGGAGATCCTCAAGAACCTCATCAGCAACTACACAACGGCGGCCGAATTCGACTAC
AACTTTGGAGATGATACTCCAGATGATGATGGAACGACAACAGCTTCGCAGGGCACCTCA
CGAAAGAACTCTCTGTCTGAAAACTCATGGGACAAGGTGCTTGGATTCGATGCTCAGTTT
CTGGGTGATATTCTGACGCCCGAAAAGAGCATGTGTCAACAGCGGTTCGAGTTGACTCTA
GACGATATGGTGTTCACTGGTCTTCCTGTGCATGTGAACGACGACGGAAGGTGGAGACGG
AAAAAGGAGTACGACAGGGAGGAGAAGGAGGTTGGAGAGGAGGACGAGGAGCCGAAATCT
AACCTCGTGTCGTTCCACGTGTCGTTTGTGGTCAATCCACCTTTGGCAGAGTACAACCAA
CGCGTGGACGAGATGTACTTTTATATTGCATCCCAACTTGCGGTGGCTTTGAGAGCAGAA
CAAGCCAAGTCTGATTGGGTGGGGCAACAGCTACGTCAGATTGCTCACCTGAGAGAAGCA
GCGGCATACGAAAAGCGTGGAATGGCGGATTTGTGGAGAGAAACAATCACTACCTGCCCT
CTGGCTCATGGCATTGCACAACTGTTTCATTCTATCCAGAACGCCTCTATTGCATCCATT
GTTCTGAACAAGAGCGTGCGGAGTTTCCAGATTCCCGTGGAGACAGAGATGGCCTCTTTA
CCGCTGGTAACTGAGCCCCACATCTCCGGTGCCTATCTTACCACCGAGTCCTTTTCAGAT
TCGGACTCAAAACAGCTGCATTTCGCTCTTCTGCTGTTGGATGAACCTGAGTCTATCATC
TCAGACCTGGAAGCGCAGAAGGACTACACTCTGTGTAATTTTATTTCCCACCTAAAACCC
TGGATACCACTCAAACAGGTGGTTCAGGACCTGCAGATTTCAGCCGAGCAGGCCCTGGGG
TTCAGCAAGCATCTTATTTATTGGCGAAGAGGACGAGCAATTCTGCCCATCAACAAGGGA
AACTCGTACATTGTGTCTCCCATTGCACCTATCGAATCTTTGTATGAATTTGCACCTCGA
TTTGCTGTCAAGTTCCCAGGCTTGCCGTCTCTTCCCAGAATGCTGTCCTCTCTCTCGACG
GGAAAGCCCCAGCAGTTCGCCAAGCTCATTCCTTCCCGCGATCACAAAACCATGTATTAC
CGGGCGCTGGCCTGGTTGCTGCAGTATGGATTTGTCACCCAGTTGCGCACTTTTCTGTAC
CTAAAGATCTCCAAGAAGATCAAGCTGCAGGTGAAGAACCAGACACGAGATAAGCGAGAC
AACGATTTCAACCTTACTAACCCTTTAGCCATCTCTCGAAAGTCGTCTGAGTCGCTGAAG
GATAGACACTTTTCTGCAAGTATCAGCAGTCATGTTTCCAAGGACTCTCCCGAGGCATCT
GAGATCCATTTTGCCGAAGATGACAGCATCGATGACTCCATCTTGCTTGAGCCCGACAGA
GCCACTCTCACCCAGCGAAAGTGGCTCAACAAGATTCTTGAGAACCAACCTCAGGATGTG
GTCTTGTTGTTTAACCGCCTCAAGCCTTACTTTAATGGCAAGCATGCCATTGAGCAGGTT
GTGATTGAGGAGGGGTTGTCTCGAAACGAGCTTAGACGACTGACTCAGTCTCTCGAAGAG
CATCTTTTGATGGTCCGCCATTGGTGATGGGTGTATTTATAGCTACAAGTAGTGTATATA
ATGGATTCCGTTTTGTATATTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E12815g_CDS-001

Protein length: 669 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0E12815g_CDS-001 MTNIPNPCLLAILVTCATSTGPQFVFHYPPKPKSYGYRAAAPVIFRENEESSGDSESSED
DLGDILSDSDESDKEEEEAPALDYRRLNKRDQGKKENRRRRKEILKNLISNYTTAAEFDY
NFGDDTPDDDGTTTASQGTSRKNSLSENSWDKVLGFDAQFLGDILTPEKSMCQQRFELTL
DDMVFTGLPVHVNDDGRWRRKKEYDREEKEVGEEDEEPKSNLVSFHVSFVVNPPLAEYNQ
RVDEMYFYIASQLAVALRAEQAKSDWVGQQLRQIAHLREAAAYEKRGMADLWRETITTCP
LAHGIAQLFHSIQNASIASIVLNKSVRSFQIPVETEMASLPLVTEPHISGAYLTTESFSD
SDSKQLHFALLLLDEPESIISDLEAQKDYTLCNFISHLKPWIPLKQVVQDLQISAEQALG
FSKHLIYWRRGRAILPINKGNSYIVSPIAPIESLYEFAPRFAVKFPGLPSLPRMLSSLST
GKPQQFAKLIPSRDHKTMYYRALAWLLQYGFVTQLRTFLYLKISKKIKLQVKNQTRDKRD
NDFNLTNPLAISRKSSESLKDRHFSASISSHVSKDSPEASEIHFAEDDSIDDSILLEPDR
ATLTQRKWLNKILENQPQDVVLLFNRLKPYFNGKHAIEQVVIEEGLSRNELRRLTQSLEE
HLLMVRHW*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG