YALI0E12705g - CDC25

Overview

Description uniprot|Q6C637 Yarrowia lipolytica YALI0E12705g CDC25 Ras guanine-nucleotide exchange factor
Locus type CDS
Gene name CDC25
Locus tag YALI0E12705g

Location

Species Yarrowia lipolytica Positions 1547182..1551318
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 4137 (nuc.)
Previous locus YALI0E12683g Next locus YALI0E12727g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E12705g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E12705gYALI0E12705g_mRNA-001YALI0E12705g_CDS-001

Nucleotide sequence

 

>YALI0E12705g
TTTTTCGACACACCTTTCGAGACCCATTCGAGACCATCTACACCACTACCGCGCCTACGA
ACCGCACCCCGACCGCACCCACGACCCTACCCTCGGTCCCCACGCCCTACACCAAGTGAA
TCGGAAAGTGAGTATCTCAGGGGTAGACACGCGCGGCGTGAGAGCACAGTACAGCACCGA
ACAACGGAACAAACAGCTCTGGCGACAACGGTCATGCAATTCTGACACGGTCGCGAACAG
GTGAAAAATCCGGCGGACGTTCTCGTAGATATTAATAGCCACCCCAGAACTAACACAGAT
GGATCTAGAGCATCCCATCCCGCCCTTGAACGTGAACAAACTTGTTTCGTCTGAGTCGTT
TGACTTTTCAGAGTCACCGTCAGACCCCGTCCAGAAAATGCTCAAGCGGAGATCGCTGAT
TCAAGCCGCCAACAACGCCGCTCTCAAACACCAGCGCAAGAAGGAAACCGACCCTGGCCT
CGAAACGCCTCCGCCATCGCCAGGTTTGGAGCAAGCTTCCCAAACTCAACTTGACAACTC
CACCTCTTCTTCCCACAACACACTCAACAACGACATGGAGAGCTCTCCTCGAACGGCAGG
CTCCAACTACACGTCGTCCATCAACATCGAGTCGCCACCGGACTCGCTGCAACAGGGCGC
AGACACACAGTCGCCCCCGTCGTCTCGACAAACATCGGTGGCCTCGTACGACTCCAACGC
GACCGACATTGAGTCGCGCAACTCGCTGAACTCGGTCTTTTTCGACTCCAAGGAGGCACC
CGCAGACCCGCGCAAGATCACAAAGAAGGAAATCAAGCAGCGCGAAAACATCAGCGAGCT
TTCAACTACCCCAGGCTCGCCCGACGGCACAGAAACAACCTCAGCGACAATCACAGCATC
CGCAGCCACCGCCTCGGCCGCAGCAACGTCCGAAATGAACTCCATGTACCCATTTCTCAG
AGCCGTGCACGCGTTCGACGCGCGCTCTCTCGAGACACACGACAAGGACTCTGTCTGTCT
CTCCTTTAAACAGACAGACTGCATTTTGCTACATGGCATGGACGTGTCCGGATGGGGAGA
CGCCACTCTGCTACACACTGGTGAGCGAGGCTGGGTACCCACAAACTTCTTCCAGCCCTT
CCAGGACCCAGAAGCAAATGCCCTGCTGGTAGCCGTGCAGAAGTTTGCTACCAACCCCAA
ATGTCACCCTACAAAGAACGGCCACACCTTTTCGCAAAACTCGGTCAACTCGGTCATTGC
AGGCGTCCGAGCATTACTTCAGGCCTGCGGTGCCCTCACACGTGACTCCCCAGCCGTACG
AAGCTCCAACTCGACGAAAAAATTCAGAAAGATGCTACTTGCCGAACTAGCCGTGTTTGT
GGGACAGGCCCGGGAGTCTAAGAACTCGACTGACGACGCACTTATCCAATCGCTGGTTCA
AAGCTGCTACAACGTGGTGTGTCGAGCTGTCGTGTTTCTCGACATCTACAATCTCAAGCG
AGACAAGTACGGCTCATCTCTAGGCAACTCGCTGGATGCAACGGCGCGACACTCCGTTGC
ATCCTCTCAGAGCATGCGTTCCGATACCAGCACGTCCAGCCATGGACGTGTTTCTGGTCG
AAGCTCACGCTCTGGGCCTCCCTCGTCTCCTAGAAAGGATTCAGCCACAGGCGAAGACTC
TCGTCAGTCTCTTGTTCTTCACAAGACTGCCCCCTTTGCCAATGCTCGTCTGGACGAGGT
GTATGACGCCCTGATGGCATACTTAAGTCTGATTCTGCGTCTGCTCAATTTGCTCGACAC
GTCTCAGGATGACGGCCAGACCATTTCATCCCAGATTCTGTACATCGCCCGAAAGAGTAT
CGTTGCTTCTCGAGCTCTGATTTCCGCCACTGAGGACGTTTCCAATAGAACTCCCCGTAC
TCGACGAGCTGAACTAGAAGCCACCAAGGACAGGCTATACCGATTGGCCACCAAGTTGTG
TGCCACCACTCGAGAGCTTGTGATTGATGAGGGCGCTACCCCCGAGTACGCCAACGAGCT
TGTGCGTGTGGTCAACAAGTGTGCAAAGACAGCTGGAGAGTGTGTTTCTCGCTCCAAGTC
TGTCTTGGAGTCCACTGGTGACTTCCAGCTGAGCAGTGACAGACCCTACCCCGACCTCAG
AGGTACTACCGTGACTATCAACTCGTTCTACAACTTACGACCTGACTCTGCTCGAGTCGG
CGAGTCTACTGCTTCCGAAGCCGAGGAGGAGGCTCCTCCTTCCACTGCTGACACTGACGA
TACGACCCAGCTAACCATGCATTCGAACGCTTCCACAGAGAGCACTGCGACTGTCGACAA
GCCTTATTACAAGCTGACATCGGCTGCTCGTCTTCGTCGATCCGTCGTGATTGACGAGGA
AGGAGATGAAGGCAACTCCACAGTCGGTAACGATGATGATAACACGGCTGTAAACGAACT
GGGACAAGAACAGGTGCAAGATGGAGACAAAGAGAAGCACGCCTCTTTGCTGCCTCCCTT
GCCTCATGTGATTCCAATGAGCCAGGGTGAGGCTGTTCTCATCAGCGAGGAGGTCGGCGA
TGTCAGTGGAATCACCATGGCTTCGGCGGATGACGACACTGTGGATCTGTCGACGTTTGA
TCCTGCCAGCAATAATCTTGCCGCTGTTTCTGTGGAGGACCAGCTCATTGTCGGTGACCA
GGGACAGATTCAGGGAGGTTCCATCCAGGCTCTTGTGAAGCACATCACCTCGACCGTCGA
CCCTTTCTTTGTGTCCGTTTTCTTCCTGTCTTTCCGACGCTTCTGCACTCCCATTGAGCT
TGCTGAGTTTCTGGTTGAACGGTCTCAGAAGCCCGACGAGGATGTCGTCATCCGAGTGTT
CAACACCTTCAAGCAGTGGCTCGAGTCGTACTGGAAGGCTGGCGACGCTGAGGCTCTTCC
ACTGATGCGATCTTTCGCAGAGACTCTGGCCAAGGAGCACAACAACTCCGCTACTGTGCT
CAAAACTTTGGTGACCAAGGCCCAGGATCCCAATTACAAGCCTCCCATCCAAAAGTGGGT
TGCTGTAGCAAACACCGGTCGTCCTGCAATGTCCATCTATAACTCTGGAGCTGTTCCTTC
CAGCAACGTGAGCAAGTCTCAGCTGACGATGATCACCAGATTTTTCGACAACGTTGCCAA
CGCTGCATCTGATGCTGGCAATCGACGAACTGCTTCTCTGACCTCCAACCCCAACTGGGC
TGCCCTTCGAAATGTGATTTCGCCCGAGGCCACTATTTCAATCGTTGGCTTCGATGCCTT
TGACATTGCGCGACAGTTGACTCTCATTGACAATGAGCTGTTTTGTAAGATCAAAACGGA
GGAGTTTATGGACCTCAACTTCGCCAGCAAGAAGCGAAAGCTCGGCAACGCGCAGAACAT
TGGAGCTATGACTCTCAACACCAACAAGCTCAGTGCTCTGGTGGGAGACTCCATTCTGCG
TCACGGGCTGAACGCCAAGCAGCGAAAGAACATTCTCAAGCAGTGGATCAGGATTGGCGA
CAAGTGTCTGGAGCTGGGCAACTTCAACTCACTGCTCACCATTGTCAGTGCTCTTCAGTC
GGTGTCCATTATGCGACTTCGAAAGACGTGGGAGATGCTGTCTCCTCGGTACCAGACCCT
CTTTGCGTCTCTCAAGGCCATTGTTCTGCCCGAGAAGAATTTTGTGGCGTACCGGTCTCG
AATCCGGCAGCAAGACATTCCTTGTGTGCCTTACCTTGGTGTCTATCTGACCGACCTGAC
CTTCATCGAGGAGGGTAACGCCGACAAGCGTCTGTACATTCCTAAAGGAGGCGATGGACA
TGCGCCTTCCGTGTCTGTCATCAACTTTGACAAGCATGCTCGAACCGCGAAGATCATTGG
CGAGATCCAGCGATTCCAGATCCCCTACCGTCTTCAGCCCGTCAAGGAACTACAGCAGTG
GCTCCACATGGAGATGGACCGTGCTCAGAGTCTGATCAGTGAAGACAGTAACGGGCTGTG
GCGACGATCTTGCATTGTCGAGCCCAAGTAAGTTTCATTACTGGGTCTTTATTTATTTAT
ACCTCTCTCTCATTTGATTGATGAATGAATTATGTATGTTATGAACCACTTCTTGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E12705g_CDS-001

Protein length: 1251 aa.
Product: Ras guanine-nucleotide exchange factor
Gene: CDC25

>YALI0E12705g_CDS-001 MDLEHPIPPLNVNKLVSSESFDFSESPSDPVQKMLKRRSLIQAANNAALKHQRKKETDPG
LETPPPSPGLEQASQTQLDNSTSSSHNTLNNDMESSPRTAGSNYTSSINIESPPDSLQQG
ADTQSPPSSRQTSVASYDSNATDIESRNSLNSVFFDSKEAPADPRKITKKEIKQRENISE
LSTTPGSPDGTETTSATITASAATASAAATSEMNSMYPFLRAVHAFDARSLETHDKDSVC
LSFKQTDCILLHGMDVSGWGDATLLHTGERGWVPTNFFQPFQDPEANALLVAVQKFATNP
KCHPTKNGHTFSQNSVNSVIAGVRALLQACGALTRDSPAVRSSNSTKKFRKMLLAELAVF
VGQARESKNSTDDALIQSLVQSCYNVVCRAVVFLDIYNLKRDKYGSSLGNSLDATARHSV
ASSQSMRSDTSTSSHGRVSGRSSRSGPPSSPRKDSATGEDSRQSLVLHKTAPFANARLDE
VYDALMAYLSLILRLLNLLDTSQDDGQTISSQILYIARKSIVASRALISATEDVSNRTPR
TRRAELEATKDRLYRLATKLCATTRELVIDEGATPEYANELVRVVNKCAKTAGECVSRSK
SVLESTGDFQLSSDRPYPDLRGTTVTINSFYNLRPDSARVGESTASEAEEEAPPSTADTD
DTTQLTMHSNASTESTATVDKPYYKLTSAARLRRSVVIDEEGDEGNSTVGNDDDNTAVNE
LGQEQVQDGDKEKHASLLPPLPHVIPMSQGEAVLISEEVGDVSGITMASADDDTVDLSTF
DPASNNLAAVSVEDQLIVGDQGQIQGGSIQALVKHITSTVDPFFVSVFFLSFRRFCTPIE
LAEFLVERSQKPDEDVVIRVFNTFKQWLESYWKAGDAEALPLMRSFAETLAKEHNNSATV
LKTLVTKAQDPNYKPPIQKWVAVANTGRPAMSIYNSGAVPSSNVSKSQLTMITRFFDNVA
NAASDAGNRRTASLTSNPNWAALRNVISPEATISIVGFDAFDIARQLTLIDNELFCKIKT
EEFMDLNFASKKRKLGNAQNIGAMTLNTNKLSALVGDSILRHGLNAKQRKNILKQWIRIG
DKCLELGNFNSLLTIVSALQSVSIMRLRKTWEMLSPRYQTLFASLKAIVLPEKNFVAYRS
RIRQQDIPCVPYLGVYLTDLTFIEEGNADKRLYIPKGGDGHAPSVSVINFDKHARTAKII
GEIQRFQIPYRLQPVKELQQWLHMEMDRAQSLISEDSNGLWRRSCIVEPK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG