YALI0E12727g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0E12727g

Location

Species Yarrowia lipolytica Positions 1551501..1552193
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 693 (nuc.)
Previous locus YALI0E12705g Next locus YALI0E12749r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E12727g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E12727gYALI0E12727g_mRNA-001YALI0E12727g_CDS-001

Nucleotide sequence

 

>YALI0E12727g
ATGAACTCCGGATACCATTACAACTACCCAGGATACCGCTACAGCTCTGTTGTCAACCCA
TTGTCACTTTCCTCTCCGACTCTGTTGAACCCGCCAGACGACCTTTTTTACGACTTCGAA
TCAGATGGGTACTACCAGGACTCCAAGAGATCTGCCTTTCAGTTGTTGGAGGATGCTCGA
GAACAGTACGAGCACAAAAAGATATCACTAAGCAAGTACTTCGATACCACTGTGGCGTTG
CTCAAAACTCTGGATACCTCAGTTCCGGTCTTCAGAAAAGCCGGGGCTATTATTAGATAT
CTACCCATTGATATCCTCGACAAGGTACGGGACAACCATGTCACTGCCCTCCTGCTCGAA
AAGCTCATCCACTACTTCTACCGTCTAGACTGGACTAATTTACTGAAAGCGTTGGAACAG
GACAGAGACACCTGGTTGTTCAATGGTTCCGGTGACACCAATAAAGAAAAAGAGAACGAC
AACTACTCGTACGCTGAGGCAGCCCTGCAACAGACTCGTGATTATGAAAAGAGAACACGG
CCGGAACAAAGGACTTTCCTACAAGTGTGTGTCTCGAGCGGCACACCCACATCCAAGACG
CGAACACGTCGGTCGGCTGGAACACAATCTCCGCCATCCACTCCTGAAAAGCAAATCCTT
CCCATCTGCCCTACATTGGCTAACTTGAGATAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E12727g_CDS-001

Protein length: 231 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0E12727g_CDS-001 MNSGYHYNYPGYRYSSVVNPLSLSSPTLLNPPDDLFYDFESDGYYQDSKRSAFQLLEDAR
EQYEHKKISLSKYFDTTVALLKTLDTSVPVFRKAGAIIRYLPIDILDKVRDNHVTALLLE
KLIHYFYRLDWTNLLKALEQDRDTWLFNGSGDTNKEKENDNYSYAEAALQQTRDYEKRTR
PEQRTFLQVCVSSGTPTSKTRTRRSAGTQSPPSTPEKQILPICPTLANLR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG