YALI0E12397g

Overview

Description similar to uniprot|P47173 Saccharomyces cerevisiae YJR142w
Locus type CDS
Locus tag YALI0E12397g

Location

Species Yarrowia lipolytica Positions 1507833..1509045
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1213 (nuc.)
Previous locus YALI0E12375g Next locus YALI0E12408r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E12397g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E12397gYALI0E12397g_mRNA-001YALI0E12397g_CDS-001

Nucleotide sequence

 

>YALI0E12397g
ATGAGCCTCCTGGAAATCATCAAAAAGTGCGATTCGGCACCATACACGCCACTGACTGAC
TATTACATCTTCACTGCTCACGAAGGAACGCCTTTGGGATACCTGACGCCTCTTGTGGTG
GCTGAATTGAAGAAGGAAACAGATACGGTCTCGGTGGACGACCACAAGAAGACGGTGACG
ATTCTGGCGCAATTGGACACGAGTGAGAAGCGGTCCGAGGCATTCGAGAAACTGGGAGAC
AAATGGCGAGCACAAAAACTCTTTGATGTACTGGAGGGTTGGAGAAACGAGAAATATGCC
ATCTACAACCCCACTGGAACGGTCTACTTTCTCATGGAGCGGGCTGTCACTGCCCTGTTT
GGTGTGGTGACTTATGGAGTACATATTGTCGGTTTTGTACCTGGAAAAACTGCCAAAGAT
GCTCGGATCTGGGTGCCCAAAAGGGCGCTTACTAAGCCCACTTGGCCCGGATACCTGGAC
AACACAGTGGCAGGAGGAGTGGGATACCCTGCCTCGTTGTGGGAGACTGCTGTCAAAGAA
TGTGGAGAAGAAGCTGGTTTAGAGCCCTCTTATGTCGAGCCTCGACTTTCTTCTACCGGT
GTTGTTTCGTACCTCTACAGAGCCACTGATGATCTCAGTGACGAACTGTCTGTGATCCAG
CCTGAAGTGGAGTATGTGATGGATCTGGAGATGGACGAGGCGACCATCCCTGCTCCTGCT
GACGGTGAGGTCGAGAGCTTTGAGCTGCTGTCTGTGGATCGGGTTCTGACGTTGATCAAG
GAAGGTAAGTTCAAGCCCAACACTGCGCTGATTACGATTGATTTTCTGATTCGACGGGGT
GTTATTGGAGTTGAGCAGCCTGGATATGTCGACATTCTCTGCCATTCCCACAGAAAGCTG
CCTTTTCCTTTGCTCAAGTAGGGGAAAATGTGCTTGATCTAGATACGCGATTCTGACCAT
ACATGGAGGAGTTGACTTGAACATGTTAAAAACAAACCGGACATGGGACATGTGAAAGTA
AAAGGCATCGCCCAAAGAATTGTCAGACTGGACAAGTTGAACAAGTCCAGACAGACCCGA
ACACACTTCAGACTGGACGATATCAGACTGACTAAGACTGAACTCGATACTTGAAATGAG
ATCGGTGAGACTTGCAAGTATTTGTACAAATAATATAACATACATATGGAAGATAATGTA
TCACTCGAAATGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E12397g_CDS-001

Protein length: 307 aa.
Product: 8-oxo-dGTP diphosphatase of the Nudix hydrolase family, putative

>YALI0E12397g_CDS-001 MSLLEIIKKCDSAPYTPLTDYYIFTAHEGTPLGYLTPLVVAELKKETDTVSVDDHKKTVT
ILAQLDTSEKRSEAFEKLGDKWRAQKLFDVLEGWRNEKYAIYNPTGTVYFLMERAVTALF
GVVTYGVHIVGFVPGKTAKDARIWVPKRALTKPTWPGYLDNTVAGGVGYPASLWETAVKE
CGEEAGLEPSYVEPRLSSTGVVSYLYRATDDLSDELSVIQPEVEYVMDLEMDEATIPAPA
DGEVESFELLSVDRVLTLIKEGKFKPNTALITIDFLIRRGVIGVEQPGYVDILCHSHRKL
PFPLLK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG