YALI0E12287g

Overview

Description some similarities with uniprot|Q7SHE8 Neurospora crassa NCU01858 Chromosome segregation in meiosis protein 3, Forms a fork protection complex (FPC) with TOF1 and which is required for chromosome segregation during meiosis and DNA damage repair
Locus type CDS
Locus tag YALI0E12287g

Location

Species Yarrowia lipolytica Positions 1495596..1496873
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1278 (nuc.)
Previous locus YALI0E12276g Next locus YALI0E12309g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E12287g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E12287gYALI0E12287g_mRNA-001YALI0E12287g_CDS-001

Nucleotide sequence

 

>YALI0E12287g
ATGGATAACGACTACGAATCGCCATGGGGTCTTTCGCAGCTTGAGGCGCCTGCAGACTCG
CAGAATATCGATTCGCAACCTCTCAACGATGACGAGCTTGGAATCAATACTGAAGTGCAA
GTCAAGAGAACCCGGCATGTGGCGAAACTAGACGATACCCGTATGATGGACGACAAGGGG
CTTCCCGCTCTCAAGCATTTGTGTACCAAGGTAAATTTGAAGGGCAATGGCCACGAGGTT
GGAGATCTGGGTCGACTACTGGACATGTACCAGATGTGGTCGCATGATCTGTTTCCCAAG
GGCCAGTTCAAGAGCTTGTATCCTCTGACGTCCAAAGCCGGTCGAACTGCAACTGTGCGG
GGACTGCGACTTGCTTGGATCGATGAGGAACAGCGTAAGAAACAGACTGCGGATGTTGCA
ACTGCAGTTGATGAGCTGGAGGACATTACAGACTTCAGAGATAGGGGACGACATTTTGAA
ACAGAGCCTCGATACAGTAGGCAATCGGAACCCCCCGTGGAGACTTCCGTGAATGTGGAC
AACCCCGACGACCTGTTTGTGGGTATGGACAGTGTTGACCATCGACTGGTATCCGACGAA
GATGTTGACATTCAGGCAGAGGTTAGTCGACGAGAGGATGATGAAGATAGAGAGCAGGAC
GTGAGCGAGCTATTGGAGGGAGCTCGAGCCCAGCGTGACAAGGACAATTCGAGATCGTCC
GGACGACTGAGTCTATTTGATCTGGGGGGGAGTGGTAGCCCCTCTGAGAGTGATCGTGGA
GGCAGTACCTTAGAAGGTGATATATTCGGCACTGGTTCTCTAGACCCCACTCCTCCACCT
GCATCTGAGACTTCCACGCAGGCACCTGCTGCTCAGCCACCAGCTACACAACCTCCTCAG
GCACCTGCTCCAACTCAACCTCCCTCCAACCAGGCACCCGTTAAAGCGCCACCCCAGCCG
ATGCGACAAATGGATGATCTGGAGTTGGACATGCTGGCTGACTTTGAGCCTGATTTCGAG
GACCAGGAACAACATGAACCCGAACCTGATCCTGAAGACTACGAGGATGACGAGGCAATG
GCCGTCATGCGAGAAATGGGTCTTTGAATCCGATTGTAATTTATTGATGAGATGTGGATA
GACGGTGATTATTACTACCGTTGTTATTTACAACTTTTATTCGCACACTTTATGCGTGTG
CTTTCTCCATTTTTCTCAAGTAAATACCAACTAACAACCCAACTAATTGTCATAAATTAA
AGATATTTTTCTGTAAGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E12287g_CDS-001

Protein length: 369 aa.
Product: Conserved hypothetical protein

>YALI0E12287g_CDS-001 MDNDYESPWGLSQLEAPADSQNIDSQPLNDDELGINTEVQVKRTRHVAKLDDTRMMDDKG
LPALKHLCTKVNLKGNGHEVGDLGRLLDMYQMWSHDLFPKGQFKSLYPLTSKAGRTATVR
GLRLAWIDEEQRKKQTADVATAVDELEDITDFRDRGRHFETEPRYSRQSEPPVETSVNVD
NPDDLFVGMDSVDHRLVSDEDVDIQAEVSRREDDEDREQDVSELLEGARAQRDKDNSRSS
GRLSLFDLGGSGSPSESDRGGSTLEGDIFGTGSLDPTPPPASETSTQAPAAQPPATQPPQ
APAPTQPPSNQAPVKAPPQPMRQMDDLELDMLADFEPDFEDQEQHEPEPDPEDYEDDEAM
AVMREMGL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG