YALI0E12309g

Overview

Description weakly similar to uniprot|L2FM00 Colletotrichum gloeosporioides prenyl protease
Locus type CDS
Locus tag YALI0E12309g

Location

Species Yarrowia lipolytica Positions 1497241..1498652
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1412 (nuc.)
Previous locus YALI0E12287g Next locus YALI0E12331g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E12309g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E12309gYALI0E12309g_mRNA-001YALI0E12309g_CDS-001

Nucleotide sequence

 

>YALI0E12309g
ATGGGCACTCTCATTGTGGTTGCTACCGCGGTGGTCTTTGTGGCCGAAATGGTGTTGCAG
GCGCGCCAGCTCGTCTATCTGGGCGCGTCCCACACGGTGCCCCCTGAATTGACACACATG
CTGGACTGTGTGGGGCTGCGCAAACAGAACCAGCTGGCGTGGGCCGAGCTGCGCAGCCAG
TTCTACCTGGCACTGCTGCCGTTTGTGGAAAAAACGGCCATTTTCGGCTTAGGTCTCTTG
CCCTGGATCATCTGGGCGTCCGAGTTCATCCAGGGCCGGCTCAGACTGCGATTGAGCCAA
ATCCACGCGCCCCAGACCCTCATTACCATGGCACTGAGCGACTGCGTCAACGCCTTTCTA
GCCTCGGCCATTTTCTACATTCTCCAACGCATCTCGCTACTGCTACATGCCTACGAACGC
GACGCAAACGTGCTCCAACTACACATTACAAAAATGGAATACCTGTCCGAGTACACGTCC
GAAACTCTGCAAAAGGGTGTCGTTCAATGTCTCATTGTGGGGTTCGCAGAGCTCGCAGTA
TCGGCATTGCCCTGGAAAAAGCCCCACATGTCTCTCGTCTTCCTTGTCCCTCTGATCTAC
ACAGCTACACACATGATGGTGCTCAAAATCCACCGCACAAGTCCGCCGCCCAATGCATAT
CCGCTCATGGAATGCCAGTTACGGTCCAAGCTCGAAAATGTGGCCCGTGACCTCAACTTC
CCTAACCCAACACAGATCTACGTCTACCACAAGGGAAAACCACGGATTCACGTGGCAGGA
TGGACCAAAAAAACCACCCATATTTATATCCACAATCATCTACTAACAATGCACACACAT
CCGGAAATCTTGCTGTTTGTGGCCCATGTGCTAGCAGGGCGACTCTTCCCCATCAACACA
GACACTTTCCCTCTGGGGTGGATGGCACTATCGGAATACACAAGAGGTGTGTTGACGCTG
CTTCTGTGTTGGAATCCGTCCTTTCACACGTACCTGGGCTTGAAGAGGTGGCAACCTATC
TTGTTGGCTGTATACATCATTCCCTGCATTCACTACCCCATCTACAAGGCGTGTCAGTAC
GCCAACAACTACTGGAAACGGTCTCAGACGTTTCAAAAGGACGCTGGACTTGTCTGTCTT
GGCAATGTACACTTGTCCTACTATGGATACACGCTTTCGTCGGCCTATAAGCGCGTGTCT
CCTCTGGATGGAGACCCTCTTTGGTTGACCGATCTTTCCGGTCGCTCCAAGCTGAAGGAG
CGATTGGAGGCAATTGGCTGGGTTCCTCGGGGGCTAGCTGAGAAAGACACTGAGAAAGAC
ACTGAGAAAGACAAGCGAAGGGCCTCTTGGTAGACTCATGTCTTTCGGACTATAGATTGT
ATTATACTCTAACGAATTACGACTTTTCTTTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E12309g_CDS-001

Protein length: 451 aa.
Product: Conserved hypothetical protein

>YALI0E12309g_CDS-001 MGTLIVVATAVVFVAEMVLQARQLVYLGASHTVPPELTHMLDCVGLRKQNQLAWAELRSQ
FYLALLPFVEKTAIFGLGLLPWIIWASEFIQGRLRLRLSQIHAPQTLITMALSDCVNAFL
ASAIFYILQRISLLLHAYERDANVLQLHITKMEYLSEYTSETLQKGVVQCLIVGFAELAV
SALPWKKPHMSLVFLVPLIYTATHMMVLKIHRTSPPPNAYPLMECQLRSKLENVARDLNF
PNPTQIYVYHKGKPRIHVAGWTKKTTHIYIHNHLLTMHTHPEILLFVAHVLAGRLFPINT
DTFPLGWMALSEYTRGVLTLLLCWNPSFHTYLGLKRWQPILLAVYIIPCIHYPIYKACQY
ANNYWKRSQTFQKDAGLVCLGNVHLSYYGYTLSSAYKRVSPLDGDPLWLTDLSGRSKLKE
RLEAIGWVPRGLAEKDTEKDTEKDKRRASW*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG