YALI0D27566g

Overview

Description similar to uniprot|D3AYC8 Polysphondylium pallidum fah Fumarylacetoacetase
Locus type CDS
Locus tag YALI0D27566g
Pseudogene This locus may contain pseudogene(s)

Location

Species Yarrowia lipolytica Positions 3655565..3656741
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1177 (nuc.)
Previous locus YALI0D27544g Next locus YALI0D27588g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D27566g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D27566gYALI0D27566g_mRNA-001YALI0D27566g_CDS-001

Nucleotide sequence

 

>YALI0D27566g
ATGTTTACAATTGACAACATTCCTTCGGCATTGTCAGTATAAACGACAACCCCCCTACCA
TTGCCACCATAATTGAGGGCTGGGTGTATGATCTACGGGCTCTGGGAGAGGGGCAGCTGT
TTCAAAACATTCCTGGAGTCCTGCGGCCCTCAAAAGCTCCTCTCTTAATGCCTTTGCTGC
TCTGGGAAACGAAGCTACAGTGGCTCTGAAGAAAGAGCTGCGAGAGTTTGTGTCCAACGA
TACAGCTCACCAAACGCCCTGCGTCTATTCCGAGTCGAAAATCACAGCCTTTCACCTCCC
TTTTAACATCCCAGACTACACTGATTTTTACGCGTCTAAAGTGCATGCGACAAATGTGGG
GGTGCTCTTCAGAGGCAAGGAGAACGCCCTTCAGCCAAATTGGGTCCACCTGCCTGTCGG
CTACCATGGAAGATCCTCATCGGTAGTGGTTTCAGGAACAGATTTTTTGCGTCCTCAAGG
CCAGATTGGCAACCCTGGCTCTGGAGAACCGGTGGTGGCTCCTTGCAAGAAGATGGATTA
CGAGGTTGAGCTGGCATGTTTCATTGGAAAGCCAAACGAAATGGGACAGCCTATTTCTGT
GGAAGACGCGCACAAGCATATTTTCGGATACGTAATCATGAACGACTGGAGTGCCAGAGA
TATCCAGGCATGGGAGTACGTGCCTCTGGGACCCTTCTTGGGAAAGAACTTCTGCACTTC
CATTTCCCCTTGGGTCGTGACACCAGATGCGCTGGTGGGGGCAGAAATTGAGCTCACCAG
AGACGCTGAAGATCCCCCCTTAGCACCGTACCTTGATGGAGGGAAGCAGATTTTTGACAT
TGACTTTGAGGTGGTGGTCAATGACAAAAAGGTGGGCGTGTGTAACTCGAAGGACCTGTA
CTGGTCCTTCCCCCAGATGATTGCCCATCATACCATTGGAGGATGTCCGTTGAGCACAGG
TGACCTACTTGGATCAGGAACTATTTCCAGTACTGGTGACTCTGGTGACGCCCTTACAAC
TGTCGGCTCGCTTCTGGAGGCCACCCACAACGGTACGAAGCCAATTGACGGACTTTCGTT
CCTCAAAGACGGCGACGTTGTCACAATTTCAGCCAAGTCTAAGAATGGCGTTGATATGGG
CTCCTGTACCGGAGCGGTTCTACCTTCATCTAACTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D27566g_CDS-001

Protein length: 392 aa.
Product: Fumarylacetoacetase, putative

>YALI0D27566g_CDS-001 MFTIDNIPFGIVSINDNPPTIATIIEGWVYDLRALGEGQLFQNIPGVPAALKSSSLNAFA
ALGNEATVALKKELREFVSNDTAHQTPCVYSESKITAFHLPFNIPDYTDFYASKVHATNV
GVLFRGKENALQPNWVHLPVGYHGRSSSVVVSGTDFLRPQGQIGNPGSGEPVVAPCKKMD
YEVELACFIGKPNEMGQPISVEDAHKHIFGYVIMNDWSARDIQAWEYVPLGPFLGKNFCT
SISPWVVTPDALVGAEIELTRDAEDPPLAPYLDGGKQIFDIDFEVVVNDKKVGVCNSKDL
YWSFPQMIAHHTIGGCPLSTGDLLGSGTISSTGDSGDALTTVGSLLEATHNGTKPIDGLS
FLKDGDVVTISAKSKNGVDMGSCTGAVLPSSN


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG