YALI0D27544g

Overview

Description no similarity
Locus type CDS
Locus tag YALI0D27544g

Location

Species Yarrowia lipolytica Positions 3653398..3655488
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 2091 (nuc.)
Previous locus YALI0D27522g Next locus YALI0D27566g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D27544g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D27544gYALI0D27544g_mRNA-001YALI0D27544g_CDS-001

Nucleotide sequence

 

>YALI0D27544g
ATGACTACACAGACTCCGGAACAAAAGTCTCGGTGCTATGAGCATGACACATACAACGAA
AAGAAGCTGCTCTTGATGCCCGTTGTCCCGACCTCTGAGGTGGTTAACTGCCGTCACTCA
GAAGAAAATCCACAGCCACAGCCACTGGGGTCGCCTTCGCCACGCGATTTCATTCTGCCT
AAGCTACGATACAACATACCAGAGACCACACAAAGGAAAACGCCAGTCCGCGACACGTTT
CCTGTCTCGGCGGCTGCATTGTCCACAAGCCATCCCTTCCAGTTCACAGTACATCCACTG
GTACAGACATCACGGTTCATTGACACACCAAGCGAATTTGGCAAGATTGCGTCTGATAAG
GATGCCATGCAAGCCATGCAGAACCGGATCCTGAACCATCCCTCACGTGAATTCATCATC
CCTCGTGAATCCGTGCCCTACAACAAAACTGACACCTTCAGATACAACAGTGGCTTGGTA
GGCCATTACCACCACTGCAAGGGAGCTGGAGCTGCACCAACGAGGCAGTCTATGGAAACT
CGTCGCCGCTTGTCTATCTGTGAGACTCTGGCTGATCGTGAAGAGCTACAGTCCCCGCCG
TACAGTCAAGCTGAAACAGTGGTGCCATCGGAGTACGTCACCCAGATTGAAATTGGAGAC
GTTTTCTCGGAGAGACGCTTGCTCAACGTGACATACTACTGGAATGGCATTCCTAGCTGG
GTGTACGAAACGGACAGAGAGTCCTTCGATCTGACTATGAGCCAGTGTCTAGTTGCCTGG
GTGTTATCGGAAGGCTTCATTGGATACTCATTACGTCCGTTCCAAAGCAGCGACTTGGGT
CCGGTGGCCAGCCAGAACCACAGACACCACATCATTCCATTTGAATCCATTCTGGGCTAC
CACCAGAGGCAAATGCGAATGAACCTCGGCCAGGTTCCACCCTATGATTCTATGCTAGAG
GTCACTCAGGTGATGATTGCTTCACATCGGTACCACGTCGCTGTGCTTGTGGTCATGTCC
AATAACATGTCCATCTTAATTGTTGTTAATGTGGCCAATGATTCAGCCAAGTACATTTGC
CACTACAACGTGACGGATTATGTGGCGCTTCCGAAGAGCAGATCTCGGTCCAAGTTCCTG
TTCCTTCTCAAAGACTACTTTGTCTTTGTGGCCGGCTTTGGAAACGCCTCTTCCTCTAAG
GGAATGGACGAGAACGATGGTCTGCCTCATTTCAAAATCATCTGCGTGTCTCGCTGGATG
CAGGAGGTGGTTCCAGAGTTCACCCAAATCAGTGAAAAGAGGAGCACCTTCTCGAGAAGT
CTTTCTCGGAACCTCTCTTTATCACGACTATCCCATGGACTCCGCTGTATCGGTGGCAAG
ATCACCAAAGACGGAAACACCTGTGAGCTGCATGTCGTCGAGGAAGACCCAAGGGCCACA
ACACTAAGCTCGCTCAACAACCTAGCACGTGCATTTACAGCCCCCTTCTTTTCTCTCATT
CGATCAGAGCTGACAGATTTTTCTAATCTGTTTGCACGTCTCAATTCTCCCTGGGCATTC
CCAGTCGCAGGCATACAGATCATTCTGTTCTTCATTTTCTTTCCATTGCTTTTGATACCC
AATCGACACAAGACGCTCGTGGTCGATCTAGGGAGTAGAGATGCCGTCAAGAGTCGGATC
AAGACCACTTGGAGATACTCGAGATACCAGGAGTCGTTTGTGCCTCTACGAGAGGAACTG
CGATCACCATTTTTTGATGTGAAAAAGACTGATACCTATGTCAGAATCCGCAAGTTCATT
CCCGATTCTGACTCACGACGGGAGTACAACCAGTCTCGCGTGTTTCGCATGGTATCTGTT
GTCTTTTACCTGTCCAGCTTGGGGCTTTTCTGCTACAGTTTCACCCGGGTTGTTGGATAC
CCCCAAGGAGATGCCTTTGATTTATTTGCTCATATCGGTCTCTGCGATGCCATGTCCATT
TTCGCGATTTCCCTGTCGCAGGATCTGGCCGTGTTTGTTCCCATAATCAAGTTTTGGATC
TTGAGAGGAGTTTCGGGCAAGACTAGGAGCAGCAGACATACTGTGCCTTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D27544g_CDS-001

Protein length: 696 aa.
Product: Conserved Hypopthetical protein

>YALI0D27544g_CDS-001 MTTQTPEQKSRCYEHDTYNEKKLLLMPVVPTSEVVNCRHSEENPQPQPLGSPSPRDFILP
KLRYNIPETTQRKTPVRDTFPVSAAALSTSHPFQFTVHPLVQTSRFIDTPSEFGKIASDK
DAMQAMQNRILNHPSREFIIPRESVPYNKTDTFRYNSGLVGHYHHCKGAGAAPTRQSMET
RRRLSICETLADREELQSPPYSQAETVVPSEYVTQIEIGDVFSERRLLNVTYYWNGIPSW
VYETDRESFDLTMSQCLVAWVLSEGFIGYSLRPFQSSDLGPVASQNHRHHIIPFESILGY
HQRQMRMNLGQVPPYDSMLEVTQVMIASHRYHVAVLVVMSNNMSILIVVNVANDSAKYIC
HYNVTDYVALPKSRSRSKFLFLLKDYFVFVAGFGNASSSKGMDENDGLPHFKIICVSRWM
QEVVPEFTQISEKRSTFSRSLSRNLSLSRLSHGLRCIGGKITKDGNTCELHVVEEDPRAT
TLSSLNNLARAFTAPFFSLIRSELTDFSNLFARLNSPWAFPVAGIQIILFFIFFPLLLIP
NRHKTLVVDLGSRDAVKSRIKTTWRYSRYQESFVPLREELRSPFFDVKKTDTYVRIRKFI
PDSDSRREYNQSRVFRMVSVVFYLSSLGLFCYSFTRVVGYPQGDAFDLFAHIGLCDAMSI
FAISLSQDLAVFVPIIKFWILRGVSGKTRSSRHTVP


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG