YALI0D27324g

Overview

Description similar to uniprot|O74907 Schizosaccharomyces pombe bcp1
Locus type CDS
Locus tag YALI0D27324g

Location

Species Yarrowia lipolytica Positions 3630351..3631511
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1161 (nuc.)
Previous locus YALI0D27302g Next locus YALI0D27346g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D27324g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D27324gYALI0D27324g_mRNA-001YALI0D27324g_CDS-001

Nucleotide sequence

 

>YALI0D27324g
ATGCCCAAGAGAGCTGCCGAAGACCAGAAACACCCCGCCGAGACCTCGTCGGAAGACGAA
TACGACGAGTCCTACCTCGAAGAGGACTCCTACGCTCCCGACTCTCCTGACGATCCGACC
ATGGAGGACGACGAGGAGGTCCCTGATACCATCGATGTGGACTTTGAGTACTTTGATTTC
AACAAGGACATTGACTACCACGCCATTGGAAATCTGCTGCGACAATTGTTGGATTCTGAC
TCAACCTCGTTCAACCTCTCTGAGCTCTCCGATATGATCCTTGAGCAGGAGTCTTGCGGA
ACCACAATTAAGACCGACGGAAAGGAGTCCGATCCCTTCGCCATCCTCACAGTCATCAAC
ATGTCCAAACACAAGGACAACAAGAAGGGAGTTATTGCTGCTCTCATTGACTACTTCGTC
GCTCGAACACAGGACCTTCCCGAGCTACACAAGCAGATGCGAAAGTTGCTGGGCCCCTCT
TCCACCTCCAAGGTTGGTCTCATCATCTCTGAGCGACTCATCAACATGCCTGTCCAGGTC
GTTCCTCCCATGTACAAGATGCTTCTTGATGAGACTAAGGATCAGGACTTTGATTACTTC
CTGGTGCTCTCGAAGACTTTCACCGAGGCCGAGACCTCTGTGGACGAGGAGGACGAGCGG
CCCTCTAAGAAGAACAAGAAGGGCCCCGGATACAAGCCCGAGACCTACTACTTCCATCCC
GAGGATGAGGTTATTCAGGAGAAGAGTACACAGTACGGCTCCTACGCATTTAAGAAGGCT
TCCCAAGAGGCTGACTCCAAGCGAGCCTTCCAGGAGTATGGTATCTTCCCTCAGGGTCAC
TTGATGCTTTTCAAGGCCAAGGATCTGGAGGCCATTGTGGCCAAGATGGAGGTTGAGTTT
GCCCCTTAAACAGGGTCCAAGTACCACTACAAATACGAGTACGAGTACGAGTATCTTAAA
GATAACTTCATTCATGTTGCAGTGCTACAGTATGTACAATCGCGAGAGCACAGATAGATT
GGTCCCCCATAGCCAGATTGGAGAACGATGTAAAAGGTTACTATGGTAGCTTACTACCGC
TTGGTACGAGTAGTAGGACACTTTTGGGATGGCCAATAACTAGAATTTAGAAGTATTAAT
GTATTTCGTGACTATAAAAAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D27324g_CDS-001

Protein length: 303 aa.
Product: Conserved hypothetical protein

>YALI0D27324g_CDS-001 MPKRAAEDQKHPAETSSEDEYDESYLEEDSYAPDSPDDPTMEDDEEVPDTIDVDFEYFDF
NKDIDYHAIGNLLRQLLDSDSTSFNLSELSDMILEQESCGTTIKTDGKESDPFAILTVIN
MSKHKDNKKGVIAALIDYFVARTQDLPELHKQMRKLLGPSSTSKVGLIISERLINMPVQV
VPPMYKMLLDETKDQDFDYFLVLSKTFTEAETSVDEEDERPSKKNKKGPGYKPETYYFHP
EDEVIQEKSTQYGSYAFKKASQEADSKRAFQEYGIFPQGHLMLFKAKDLEAIVAKMEVEF
AP*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG