YALI0D27060g

Overview

Description weakly similar to uniprot|Q873C1 Neurospora crassa Hypothetical protein B24N11.020
Locus type CDS
Locus tag YALI0D27060g

Location

Species Yarrowia lipolytica Positions 3601978..3604876
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 2899 (nuc.)
Previous locus YALI0D27038g Next locus YALI0D27082g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D27060g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D27060gYALI0D27060g_mRNA-001YALI0D27060g_CDS-001

Nucleotide sequence

 

>YALI0D27060g
ATGTCTGATGATTTACGCCCGTATCAATTGGACCGGCCGGCCAACCAAACAGGTCGGCCT
CAGCCTCTCGGCCCTGGCGACTCACCCGCCGTGTCTCCCACAAATGGTACAAAACCAGCG
GGGTCCAAGCGCAATTTAATACCCGCGACAGAGAGATCATTTTTGACCGTGTCAAACACA
ATTGGAGCGAGCGCCTCTTCCAACATGACCTTTGATGTCCAGAGACAGACCATAGCATAC
ACTGCCGGTACAGGCGCAGTTCTGGGTCACTACAGCACGTCTTTGGGTCTCAAACAACGG
TACTTTTGTTTGAGGAACACAGATCAGCTCAATGCGTCTTTTGAAGCGTTCCAAATCACA
GCTACGCGAGACAGCTACGGGTTTTCATCACAGACACAGTATTTGGGAGCGTCGGAAGAA
TCTCCGGTGGATGCTTCGCCTCCTAAAATGCCTTCTCCTGTGAAAGAACGCGCCAAGAGT
GCTACTGCTGTGGCTATCAGACCAGATGGGCGCCTATTGGCATTGGGAGAAACCGGGCAC
AGTCCCAAGATTTCGATTTTCAGCACAGCACCGGATTCTGATTCCAGTTGTCCGGTTGCA
GTGATCACTCAGCACTCTTTTGGAGTACGGTTCCTGCGATGGTCCCCTTGCGGGACATTT
CTGGCCTCTTTGGGAACCCTAAATGACGGTTATCTTCACATTTGGCATGTCCAGGACAAG
GGTGTACGTCTACATTCGTCCAACAAATGCATATCCCAGGTGGAAGACATGCGGTGGCTC
TCGGACAAGATTCTTATCACTGTTGGAGATCACCATGTCCGGGTATGGAAGGTAGAGGAT
AAGGAAGGAGGGCTTCAGAACATTCAGGTTCTGTCGGGCCGAAATCCTGTGATGGGATTG
GTCAACAATGTCACCTGCACCTCCGTATGTCCCATTAATCAGCTCGAGGCTGTCATTGGA
AGTAAGGAGGGGCTAGTGGCAGTCTTGAATGTATCTGAAGAGACTCCCAAGCTTACTATC
CGTTGGCAGAGGCTATCTCCCGTTTCTGCTGTGTGTATGAACTCAGATGGTGAGATATGT
ATGGCATTTGGAGGTAAGATTGCAGTGGTTTCTCTCGATGAGGTGCTCCAAGAAGAAGGG
GAGGACTTTGGGCCTATTGGAACCGAAGTTCAGCAATCGCCCATTGTTTCCCTGGCCGAG
TTTGGGTCTCGTTTGGTCTGTCTTGATTCCAATCGAGATATTTCGCTGATTCAGGACATG
AAGTCGCAAAGCATTGTGCAGGGTCAGCAAGGAATCATCAAGGGCTTGACTCTAGGCATG
TCACAGGTCTTTTGGACTGCTGATAGGGTCACCTGTGATGACACAAGCATTAAACCTGAG
CTTGGAAAGTTGAACGATGAATCGGACAACGAAATCTCGCATGCTCTGAGTCTTGGGTCA
GACGTGGCTATCGGCGATAGAAGCGGAAGACTTAGTCTTTATAACGAAGGTTCTTGCAAG
TTCTCCACACAAGCGCACCAGGCAGATATCACTGGTATGGCGTTTCATGACGGAACTTTG
TTTACTTGTTCGCGAGATCGTACAGTGCAGGTCTTCTTGGTATCGCATTCATCCATGGAA
CTCCAGCAAACGATTGTGGGTCATACCGCGAATATTCTGAAGCTCGTTGTGGCGGATCAG
CGGCTGTATTCGTGCTCTGCAGATCGCTCTATCGGCGTCCATGCTCTCACTGGTGGCGTT
TGGGCCCCCCTCAAGTCCATCAGTCTCAAGAGCTCGCCTCTAGATGTCATTCTTGTCGAC
AACGAGCTGATTGTCATCTGTTCTGATAAGCAGGTGTATGTTTATCGAACGGACAAGTGT
GAGTTGGTGCGTAACTACAAGTGCGCCAACTCTCGGGGCGACGGGCTGAGTGTGACTCGA
ATCGTTTTGGGCAAGTTTCAGCACGGGGGAATAAAGAAGGACATTCTAGTAGGTGTGTGC
ACGGACAAGTCTCTTCGGTTGTTCGATCATGCTACAGGCGCTCTTCTAGCGTCCGAATGG
GGTCATTCAGACGGCGTCTCGGGACTCATTTTAAAACCCCAGAGTGCTGTGTCTGCCGAG
GTTGTCACATCTGGAGCGGATGGGTGTTTGTTCGTGTGGAAGCTGTCTCCATGGGTTGAG
TCTGCTGTTGTATCGGGCTCTGCTGCATTAAGCACTTCTCCTGTGGCTCGAAAGGTCATC
CCCAAGCTTGAGCTGTCTTCCATTGCGCGTGAGAACAACCTTGATACACCCAACTCGCCG
GTCCTCAGACCTTCACCACTGAGAAAAAGTGCAGTTGACAGCAACGGGTCCCCTATGACC
CGCACGGCAGGCAGACCTTCGTTCCGCAGCAAAGAGACTCCTTCACCTGTTCGAAATGAG
CGTCCGATGTCCCCGGCCAGACCCAAGAGTCCCACCAGAGTCAGCAATGTCGCTATTATG
GGCGACAAAAGTCCTAGCAGGATGGGCTCTTCTGGAAGTTCGAGAGGCATCAGCAGTGGT
AGTCCCAGGGCAGGAAACGTTTCTATCGATACCATGAAGACTGACCTTTGCGTAAGACTG
AAGAGGTTCCGAGGCGAGTTTGATAGCAAGGACGACCGAGAGAAGGACTACAGTGCCCTT
CAGGAAGAGCTCGAAGCTACATTGGCCCTTTTGAGGGGCGGCACCGGCCTTCCAAAGGCA
GAAACCAATCTTCCGTCCGCAAGATGCACAACCCCTGCTATGGATATGGAGACGATTGTT
CGAGAGTTTGGTGACAAGATTTACTCTTTGCTGGAGGACAAAATGAAGGGCGGGGGTGAG
TGAGAACTCCGGGTGCTAGCTCTGAATGGCAGCGCTGTCTAATTTATTAACGCAATGAAA
ATATTTATTAACTACCTGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D27060g_CDS-001

Protein length: 941 aa.
Product: Conserved hypothetical protein

>YALI0D27060g_CDS-001 MSDDLRPYQLDRPANQTGRPQPLGPGDSPAVSPTNGTKPAGSKRNLIPATERSFLTVSNT
IGASASSNMTFDVQRQTIAYTAGTGAVLGHYSTSLGLKQRYFCLRNTDQLNASFEAFQIT
ATRDSYGFSSQTQYLGASEESPVDASPPKMPSPVKERAKSATAVAIRPDGRLLALGETGH
SPKISIFSTAPDSDSSCPVAVITQHSFGVRFLRWSPCGTFLASLGTLNDGYLHIWHVQDK
GVRLHSSNKCISQVEDMRWLSDKILITVGDHHVRVWKVEDKEGGLQNIQVLSGRNPVMGL
VNNVTCTSVCPINQLEAVIGSKEGLVAVLNVSEETPKLTIRWQRLSPVSAVCMNSDGEIC
MAFGGKIAVVSLDEVLQEEGEDFGPIGTEVQQSPIVSLAEFGSRLVCLDSNRDISLIQDM
KSQSIVQGQQGIIKGLTLGMSQVFWTADRVTCDDTSIKPELGKLNDESDNEISHALSLGS
DVAIGDRSGRLSLYNEGSCKFSTQAHQADITGMAFHDGTLFTCSRDRTVQVFLVSHSSME
LQQTIVGHTANILKLVVADQRLYSCSADRSIGVHALTGGVWAPLKSISLKSSPLDVILVD
NELIVICSDKQVYVYRTDKCELVRNYKCANSRGDGLSVTRIVLGKFQHGGIKKDILVGVC
TDKSLRLFDHATGALLASEWGHSDGVSGLILKPQSAVSAEVVTSGADGCLFVWKLSPWVE
SAVVSGSAALSTSPVARKVIPKLELSSIARENNLDTPNSPVLRPSPLRKSAVDSNGSPMT
RTAGRPSFRSKETPSPVRNERPMSPARPKSPTRVSNVAIMGDKSPSRMGSSGSSRGISSG
SPRAGNVSIDTMKTDLCVRLKRFRGEFDSKDDREKDYSALQEELEATLALLRGGTGLPKA
ETNLPSARCTTPAMDMETIVREFGDKIYSLLEDKMKGGGE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG