YALI0D27038g

Overview

Description similar to uniprot|P38995 Saccharomyces cerevisiae YDR270w CCC2
Locus type CDS
Locus tag YALI0D27038g

Location

Species Yarrowia lipolytica Positions 3598558..3601432
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 2875 (nuc.)
Previous locus YALI0D27016g Next locus YALI0D27060g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D27038g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D27038gYALI0D27038g_mRNA-001YALI0D27038g_CDS-001

Nucleotide sequence

 

>YALI0D27038g
ATGAAAGAAGCTGGTGATAGCTCCACAACGCCACCTAAGCCCGACACCACCTCGGCTTAC
CAGGTCGGCGGCATGACATGCGGATCGTGCGTCTCCGCCATCATCAACGGCCTGGAGGCA
TGTCCCGGTGTCACAGAAGCAGCTGTGTCTCTGGTCACCGAACGAGCCAGTGTACACCAC
AACAAGAGCATAATCTCCGCCGAAGAGCTGCAGGAAAGAATAGAGGACTGCGGCTTCGAC
GCCTCGCTCATCGACTCATCGCCGATAGCTGCGCCCGTCAGCACACCCATGGAACGTCTC
AAGGTTAAGATCTTCGGAATGACCTGTTCCAGTTGTACCAACGCAGTGCGAGACACTATC
CAGGACATTAGAGGCGTCGCCAATGTCGTGGTTGCTCTCGCGACTGAGGAGGCCACCATT
TCTTTCAATCCCCAGGAATGTGGAGCTCGAGACATCATCAACGCCATTGAAGACTGTGGC
TTTGAGGGCGTCCTATCTGCACAGCAAGATAACGCTACCCAACTAGCAAGCTTATCTCGA
ATCAAGGAGATACAGAAATGGCGAAGCGACGGTATCCAGTGTTTCATTCTTGGTCTGCCT
GTGATGTTGCTCACTCATATTCTTCCCATGGTTGGTCTCCAGCCTCTGCATGATCTAACC
ATCTTCAAGGGCCTGTACGTGGACGATCTCGTCTGCTTTGTGCTGGCAACATACATCCAG
TTTTGGCTGGGCCACAAGTTCTATGTCTCTTCGCGACGAGCTCTGTCCCATGGAACTGCC
ACCATGGACGTGTTGGTGGCCATCTCCACCTCCTCAGCCTACTTCTTTTCTGTCTTTTCC
ATGCTCTATGCGATCGCCACTGTGGCCGATACTCACCCTCATACTCTGTTTGAGACTTCG
GCAATGCTGATTGCCTTCACGACCCTCGGAAAATACTTGGAAAATCGAGCCAAGGGACAG
ACCTCGGGTGCCCTCAGTAAGCTTATTTCCCTGACTCCTACCACTGCCACTATTCTCAAG
GACTCCTCCAAGTACGACCCCAGTATTGTATACGACGAGTCTGCCGAGATGGATATTGCT
GCCGAGCTTCTTCAGAGAGGTGATATTGTCATTCTCAAGCCTGGTGCCAAGGTACCTGCT
GACGGAGTCGTCGTTTCCGGTGAAACTTATATCGATGAGTCTCTTCTCACTGGAGAGTCT
ACTCCTGTGGTCCGAAAGGTTGGAGACCAGGTTGTGGGTGGCTCCATTAACGGCTCTGGG
CGTATTGACTTCCGAGTCGAGCGTGCTGGTAAGGATACTGCCCTTGCCAACATTGTCCGG
CTAGTTGAGGAGGCCCAGACCTCTCAGGCCGAGATCCAGCGATACGCCGACAAGATTTCC
GGAGTCTTTGTGCCATGTGTTGTTGCTCTTGCCCTGCTTACCTTCATCTTCTGGATTATC
ATGAGCAACGTCATGAAGCATCCTCCTAACGTCTTTTCTCTGCCCGAAGGAAAGTTCCTC
ATCTGTCTTCGTCTGTGCATCTCTGTCGTGGTCGTTGCTTGTCCCTGTGCTCTTGGTCTT
GCCACTCCCACAGCGGTCATGGTCGGAACTGGTGTTGGAGCTACTCATGGTATTCTTGTA
AAGGGCGGAGCAGTTTTGGAAACCGCTTCAAAGATCAAGACTGTTGTTTTCGATAAGACT
GGTACACTCACCACCGGCCGAATGACCATTCAAAAACACGTCTTTGAGAAGGATACTCTC
AAGAACCTCAACATGACCGAAACTGAAATGTGGCTAATTCTGGCTGGCGTGGAGGCTTCG
TCTGAACATCCCATTGCCCAGTCTCTAGTTCGACAGGCGAAGGAGGCTGCCCAGGTTGAG
GATGTTCCCGGTGTGGCTGACTTTGTTGCTATTGTTGGTCAGGGTGTTACTGGTGTAGTT
GATGGCCACAGTGTTGCTGTTGGCTCTTCTGAGCTTGTCAACTCGTCCTGCAAGTCGCTG
GATAAGCCCCCCGCCACCCCTCACTCCCCTGACAACCCTGCTACTGTGATCCATGCTTGT
GTTGACGGCCAGTATGTCGGTTACATGGCCTTTGCTGATAGCGTCAAGTCCGACGCTCGA
GCTGCAGTGTCTGTGCTCAAGAAGATGGGAATCAACGTCGCCATGATGACCGGAGACAAC
CACTTCGTTGCCCACGCTGTTGCTGATGAGGTCGGTATCCCCCGATCCAATGTCTGGGCA
TCGACCTCGCCTGCTCAGAAGCTCGCCATCATCGAACAGCTGCAGGAGCCCCAGGACCCC
AACGAAGCTGCTGACTCCACAGATCTGTCTCTAAATGCCTCTGTGGTTGCCATGGTCGGC
GATGGTATCAACGACTCGCCTGCCCTGGCCAAGGCTGCTATTGGAATTGCAATGTCCTCC
GGAACCGACATCGCCATGGACGCTGCCGATATTGTGCTGCTCAACAAGGAGAGTCTCATG
GACGTCCCTGCCTCCATTAACCTATCGCAGGTCACCTTCCGACGAATCAAAATCAACCTC
GTGTGGGCCTCCGTGTACAACCTGATTATGATTCCCTTTGCTATGGGCTGCTTCCTGCCA
TTCAACTTTATGCTGCACCCCATGGAGGCATCTGCAGCCATGGCGCTGAGTTCCGTGTCT
GTTATTGTTTCTTCTCTGGCTCTCAAGAAATGGCAACCCCCCAAGGACACCGAATATGGC
TCTGACGAGTGGCGAGACATGGAGAGCCAGACAGTCAAACCCAAGCGGCGTTGGTGGCAG
AAGCTCTGGAGAAGCGAGGGTGTTCGATACGAGCGGCTCTAGGCAAACCGGGCAACTGTG
GTTTGCTGTAAATTATTATAGACTTTATGAATAACGATGTATAATGGTGCACTTC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D27038g_CDS-001

Protein length: 934 aa.
Product: Cu(+2)-transporting P-type ATPase, putative

>YALI0D27038g_CDS-001 MKEAGDSSTTPPKPDTTSAYQVGGMTCGSCVSAIINGLEACPGVTEAAVSLVTERASVHH
NKSIISAEELQERIEDCGFDASLIDSSPIAAPVSTPMERLKVKIFGMTCSSCTNAVRDTI
QDIRGVANVVVALATEEATISFNPQECGARDIINAIEDCGFEGVLSAQQDNATQLASLSR
IKEIQKWRSDGIQCFILGLPVMLLTHILPMVGLQPLHDLTIFKGLYVDDLVCFVLATYIQ
FWLGHKFYVSSRRALSHGTATMDVLVAISTSSAYFFSVFSMLYAIATVADTHPHTLFETS
AMLIAFTTLGKYLENRAKGQTSGALSKLISLTPTTATILKDSSKYDPSIVYDESAEMDIA
AELLQRGDIVILKPGAKVPADGVVVSGETYIDESLLTGESTPVVRKVGDQVVGGSINGSG
RIDFRVERAGKDTALANIVRLVEEAQTSQAEIQRYADKISGVFVPCVVALALLTFIFWII
MSNVMKHPPNVFSLPEGKFLICLRLCISVVVVACPCALGLATPTAVMVGTGVGATHGILV
KGGAVLETASKIKTVVFDKTGTLTTGRMTIQKHVFEKDTLKNLNMTETEMWLILAGVEAS
SEHPIAQSLVRQAKEAAQVEDVPGVADFVAIVGQGVTGVVDGHSVAVGSSELVNSSCKSL
DKPPATPHSPDNPATVIHACVDGQYVGYMAFADSVKSDARAAVSVLKKMGINVAMMTGDN
HFVAHAVADEVGIPRSNVWASTSPAQKLAIIEQLQEPQDPNEAADSTDLSLNASVVAMVG
DGINDSPALAKAAIGIAMSSGTDIAMDAADIVLLNKESLMDVPASINLSQVTFRRIKINL
VWASVYNLIMIPFAMGCFLPFNFMLHPMEASAAMALSSVSVIVSSLALKKWQPPKDTEYG
SDEWRDMESQTVKPKRRWWQKLWRSEGVRYERL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG