YALI0D25762g

Overview

Description weakly similar to uniprot|Q06182 Schizosaccharomyces pombe Mating-type switching protein swi10
Locus type CDS
Locus tag YALI0D25762g

Location

Species Yarrowia lipolytica Positions 3424314..3426068
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1755 (nuc.)
Previous locus YALI0D25740g Next locus YALI0D25784g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D25762g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D25762gYALI0D25762g_mRNA-001YALI0D25762g_CDS-001

Nucleotide sequence

 

>YALI0D25762g
ATGTCAGGACAAAAACGCGACATTGCGGCAATTCTAAAGGGCGTGGCGGAGTACCAGGGT
ATTAAGAAGTCCGCCGTTGAGGGTTCAAGCGGTAACGGGGCTCCGAAAGACCCCGCACCA
TCTTCTACTGTAGCCGCCACTTCTACCTCAGCTTCAACCCGTTCAACAACTCCTCCACCG
AAGCCAACCCCGCCACAAGTCAGTCCGCTGCGAAAACGCGTGCCACCAGCGATCCCTCAG
CCCAGAATTGTGCGCCCGGCGGGGTACAAAGAGCATACTCCAGCCGCAACTAAATCTACA
TCTACAACTACATCGTCTGTTCCAGTATCTAGGATAACAGCTACACCTCCAGCTCCTCAA
CCGGTGAACACCCGGCAAAACAACAATGAAATATCGCTGGAGGCGTCAATCCAACAAGCC
AGAGAAAACATCAAACGAGCTGAAGCCGCTGCTGTGGCTGAACCCACGGCTCCTGTGGTA
TCGCGTCAACGCCGTATCCCAGCCATTCTCGTGAACAAAAACCAGCGAGGAAACAAAGTG
CTGGACTACATCAAGGACGTGCCATGGGAGTATGGCGCGGGCGATATGGTGGCGGACTAC
GTGACAGGGTCGACGTCGTGTGTGCTATTCTTGTCCATCAAGTACCACTCGATTAAACCA
GAATACATCTACCGTAAGATCGCCAAGTTGCAGAAACAGCAGTTTGACCTGAAAGTGTTG
CTGGTAATGATTGACAAGGAGAATCACGAGGCTGCTATCAGAGAACTCACACGGGCTTCC
ATGAGACACGATCTGGCCATTCTTGTGGCATGGAGTAACGAGGACTGTGGTAACTACATC
AGCAAGCTCAAAAGTCTGGAGACAGCCACAGTCAAGCTCATTGAGGGAAGCAAAAGCAAG
GACTACACCTCTCGATTAGCTGACGTGTTGAGCAATGTCAAGCTGAACAAGAGTGATGCT
CTCAATCTCAGCACGACGTACAAGAGCTTGAAGAATGCCATTTTGGACGATTCTGAACGA
ATTTCTGAGATCAACGGCTTTGGCCCGACCAAGGTGAAGAGATGGAATCAGACGATGCGA
GATCCTTTTATTTATAAACCGACTGCGGAGTGACAGATGACAGCAGATGAAGAGGCCTGC
TACGATGGAGTGGCGACTACAGCTGCATAGTCGCCAGTTCAAGGGCCTATTTGTTCATAC
GAAGGCGAATAAGCAGCACCTGATTGAGCAGCTAGTGATCACACAGAACTACAGAACTAC
ATTACAGTATTGTACAAGTATTTGTACTGTAGTAGACGTGCACTCAGACACCTATGACAA
TGGGTCACGAAGTGTGGATCACGTGTGTTGCTCTGAGAATCGGTTCATCGTGGTCAGAGA
TGACAGTATACCTCGACGTTGACTCTTACTCTATGTTTTAGCGTGCGTTGTGACATCTGT
GTGTATCTCACACAACCCATCACATCTGCCAACATCGAGGCCTCGCTCACTGCAATCACC
GAGTGCAGTTGGGGTATATGATATATGGTTTTGCAGAGGCAGAAACTTGAGCATACTGTA
ACTACGGTCAAGTAATTTTGTCAAGAAAAGTCGGCATGACAGTTGGCTTTGACAAGCTCA
GAGCTGAAGACCTACTGTATCTGAATGAGAGTAAACACTCTAGATAAAAATTAGAGGCCC
ACTCTCTGGCCATGAGCTGAAACATATGAACGATCGGATATGAAATGCAAGAATTGAATT
GAAATATATAAAATG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D25762g_CDS-001

Protein length: 371 aa.
Product: Conserved hypothetical protein

>YALI0D25762g_CDS-001 MSGQKRDIAAILKGVAEYQGIKKSAVEGSSGNGAPKDPAPSSTVAATSTSASTRSTTPPP
KPTPPQVSPLRKRVPPAIPQPRIVRPAGYKEHTPAATKSTSTTTSSVPVSRITATPPAPQ
PVNTRQNNNEISLEASIQQARENIKRAEAAAVAEPTAPVVSRQRRIPAILVNKNQRGNKV
LDYIKDVPWEYGAGDMVADYVTGSTSCVLFLSIKYHSIKPEYIYRKIAKLQKQQFDLKVL
LVMIDKENHEAAIRELTRASMRHDLAILVAWSNEDCGNYISKLKSLETATVKLIEGSKSK
DYTSRLADVLSNVKLNKSDALNLSTTYKSLKNAILDDSERISEINGFGPTKVKRWNQTMR
DPFIYKPTAE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG