YALI0D25498g

Overview

Description weakly similar to uniprot|F4NZ48 Batrachochytrium dendrobatidis hypothetical protein BATDEDRAFT_36714
Locus type CDS
Locus tag YALI0D25498g

Location

Species Yarrowia lipolytica Positions 3399223..3400369
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1147 (nuc.)
Previous locus YALI0D25476g Next locus YALI0D25520g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D25498g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D25498gYALI0D25498g_mRNA-001YALI0D25498g_CDS-001

Nucleotide sequence

 

>YALI0D25498g
ATGGTGTCTAAGCTGGTTGGACGGACGAAACCGGCTGGAGATTCGCAGAAGACTGTCAGA
ATCGACGAGAAAGTGGAAATCAAGGAGTTCCAAGCACATAAACCCGAGATCATCGACAAC
ACAACAGAAATCCCTGCTCCGGTGCCCATGTCTATTGCTGAACGGAGTATTGCCGACGCA
GCTCGTCCTCCGTTGCACGCGTCGCCATGGCGCGTTTTTCTGACGCTATTTGCGGAAAAG
GGCGGTCTGGACAAGACCATCAAGCTGATCCAGTACACAGGACGTCTTCTGCTTTGGGCG
GCCAAACAGGGGTGGTTCACACGACACAAACAAATGATGCTTTTATGGAAACTGGCCGAG
ATGGAGTCGCGCCTGAATGGTATGGTTTCCAACTTTTCGCAGTTCCGAAAAATCATCAAA
TTAGGCGAGTGGTTGGGTCCTGTGGAGGATTTGGTCACAACCAAGAACCCCTTGACTTCA
TTGGCGTTCCAATCGGAGCTCATGGAGGTCATAAACACTATCGGTGACGACATTTACTGT
CTCAGCAAAATTGGAGTGGTCAAGGGCAAGAGACTCGGCCGAAACGGAGAGCTCATGGCC
AACTGGGGATGGTACGGAGCCATTTTCATTAATATCAAGGTCGGCATAGAAACTTATCAG
CTGGCGGCTAAGTCTGGCGACGAGGCGGCTATTTGGGATGCCAAATTGACGCTGTTCAAA
CTCGCTAACGACTTTATCTTCTGCACCATCGACTGTCTGGAGCCGGAGGGTCTGAGTAAC
ATTTACCAGACAGTAACTGGACTGGCAAGTGGCTCTGTGGGCTTCTATAAGCTGTGGAGA
AAGATTAGCAAAAAGCTGGACAAGGAGTTGGAGGAGAAGGAGCGATGCAAGACCTGCTAG
ACTTCGCAATCAGACAGCCCTATACCAAAACTACAATTTGAGGAGTCACAGAAACCGCTA
CTATGACGCTACAAGGTCTCATATTCCGTCTTTTACATAAGAAGCCGAATATTCGAACAT
CAATTAGAACCGTCTGAATACCCAACACCGTTTTTCTTCCGGATACAGGTCTTTTTCCAT
TGATATCGTGTCCCGTCTGCTACAGACATTGTCTATAGACATATTTATAATAGAAAGTTA
ACCAACG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D25498g_CDS-001

Protein length: 300 aa.
Product: Conserved hypothetical protein

>YALI0D25498g_CDS-001 MVSKLVGRTKPAGDSQKTVRIDEKVEIKEFQAHKPEIIDNTTEIPAPVPMSIAERSIADA
ARPPLHASPWRVFLTLFAEKGGLDKTIKLIQYTGRLLLWAAKQGWFTRHKQMMLLWKLAE
MESRLNGMVSNFSQFRKIIKLGEWLGPVEDLVTTKNPLTSLAFQSELMEVINTIGDDIYC
LSKIGVVKGKRLGRNGELMANWGWYGAIFINIKVGIETYQLAAKSGDEAAIWDAKLTLFK
LANDFIFCTIDCLEPEGLSNIYQTVTGLASGSVGFYKLWRKISKKLDKELEEKERCKTC*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG