YALI0D25476g

Overview

Description similar to uniprot|O93921 Emericella nidulans Pantothenate kinase
Locus type CDS
Locus tag YALI0D25476g

Location

Species Yarrowia lipolytica Positions 3394787..3397473
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 2687 (nuc.)
Previous locus YALI0D25465t Next locus YALI0D25498g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D25476g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D25476gYALI0D25476g_mRNA-001YALI0D25476g_CDS-001

Nucleotide sequence

 

>YALI0D25476g
GACAGACTGATTTGTGTGCAAACACGGCCGACCAGACGCAGACACAGACACAGACGCAGA
CGCGACACATCCAGGCATCGTCACATTCTTCCTCGTGGCACTTTGCTCCATTGCTTCAGA
CTCAGCAAGTTACACAGACGGACACTACACCGACACAAACGTCTCACTCCGGAACAGCAC
CGAGACAGTGAACGACTCTCAGACCCAGACACAGCCACAGACACGGATACAGACACAGAA
GAACGACACAGACCCTGAGAATCGGGCCATCTAGCATACACAGACACGACAGTGAGTATT
ACCCAACCGCTAACGGCGGTGTGATGGGGTGGGAAGATGGGTGGCATCCTGAGACAAGGT
CGCTGCGATAAGATATCGGGATGGTGGGTGAGCTAGTTGGGGGGAGGTGAGCTAGAGCTA
GTTGGCATGGTATGGAAGCAGTTGGAGTGCAACGGATACTAGAGAGCAGGCACAGCTGGA
AAGGGGCAGACTATGACTGGTTTGGCCGAAGTTGATGTCTGTTCCAGACATTGAACGTAT
GGTGTGATTGTGATGTTTAGTTTACAATGGTGCTGTGCTCTGGTCTGTACCATGCATCTG
CGGATCTGCGATACCACTGCTCACCGCGACGTCACTGGTATCTCCAGTTTCACCTGCTGT
CGTCAGCTCTGGGCCATGGCTACGGCCTTAGTCAACCTCCTAAAGCTCTCGTACAGTAGG
ATTATGCCCTTGAACGGTTACGACTGTCACAGGCTTGTCATGCTTCAACATGTTGTTGTC
CCCTGGCTACGCTGTTCTGCCCGACAGTCTTACCCAGAGCCACAGTTGCCAGCTATTACT
TCCTTTGCTGTCAGCGGCACGATCTACTGTTCCACTTCTAATGCAACGGGAGTCAGGTAC
ACAGTGTGACACTTTCTGTTGTCACCTCACAGCGAATGCCATTCCACACCCTATTCTACA
GAATCACTGGGGATCTAGGTCTGCAGACAACATCTCGGCCACCCAGAGCGCGTCGACTCC
AATACTAACGTAGATGCAACAAGCAACACAGGAACTGAAGGATATCACAGCTCGGTCCAG
GGACTCTCCCCGCACCTCTGCCCTCAAATTCCTCCACGCCGGTGACATTCAGATTAACGT
GGAGGGCGCTTTCATTGTTAATAAGGATCAGAATGGCCGAGAAACGCCCCCCGACACACG
AGACATTGTTCTTCCCCACCACACGGCCCATGTGTCACACATTGCCATTGATATTGGCGG
CTCACTGGCCAAAATCGTCTACTTCAGTCACGACGAGCCTAACGGCGACACTCTAGAGGA
CGTGGGTGGTCGTCTCAACTTTACAGTGTTTGAGACGGACAAGATAGATGACATGATTGA
CTTTCTCAAGGGCCTCATGTCTCGTCTTCAAGACAATCATCGACGCAGCTCCCGGTCCAA
CGAGCGACTCACCCCCGACGGCTCGTCGATCCGGTCATCATCCCACGACTCCACCATTGC
TGCGAGTCCCACAAAGCCCCAACAGTCCAACATGCGCATCATGGCGACCGGAGGGGGCGC
ATACAAGTTCTACGAGCGGTTGCGCAACGAGCTGGGCGCCGATATCTCTCGTGAGGACGA
GATGGAGTGTCTGATTGCTGGGCTGGATTTCTTCATCACGGAAATCCCGGAGGAGGTCTT
TTGCTACTCGGAAACGAACCCAATGGTGTTTGCCGAGCCCCGCCAGCCGTCCATCTACCC
GTATCTATTGGTGAACATTGGTTCCGGCGTTAGCATGATCAAAGTTCTTGGTCCGCAACA
GTTTGTGCGTATCGGTGGCTCCTCTCTTGGAGGAGGCACTCTGTGGGGCCTGTTGTCGCT
TCTTACCGACGCTACGTCTTACGACGAGATGCTTGCCAAGGCTGCCGAAGGAGACAATTC
GAATGTGGACATGCTTGTGGGTGATATTTATGGCCAGGACTACACAAAGATTGGCCTGAA
GGCGACAACTATTGCCAGTAGTTTTGGACGAGTGTTCAAGGAGATTCAGAGGGACCGTGA
AAGTGGAGAAGGTGATGGAGGCGACGGCAAGAGTGGGGGTGACGTCGACGCCAAGAGCGA
AGCTTCGGCATCGTCCACCGATTCTGCATCTTCTCACGCGCCCAAGTCCTCTCGGGACTT
GTTCAAGAGTGAGGATATCTCTCGGTCGCTTCTCTACGCTATTTCCAACAACATTGGCCA
GATTGCATTTCTGCAAGCGCAGATCCACAATCTCCAGCACATTTACTTTGGCGGATCGTA
CATCCGGGGCCACCTGCAAACCATGCATACTCTGAGTTACGCCATCAACTTTTGGAGTCA
GGGAAGTAAACAAGCTTACTTTTTGCGACACGAGGGGTACCTGGGTGCTGTGGGTGCGTT
CATTAAGAAGCAACCCAGCGGCTGGGGACGACGGAACTCGGCTGGGGAGTTGGAGCGTTT
CATGCAGTAGTTTTCTAAGCTCAGCGAAGGATGCTACTGTAACCGTGTGAAGAAGAAGAG
ATGGAATAGCTTGCCGAAGTGGAAGCGGTGCAGCGTATTAAGGCGAGGTGAGGGACCAGG
TGGTAGACGTGCAGTCGGCGCGGCGATATAGATGCTGCCGATGCTGCTATTACTTTGTGC
ACAGAGCACATGCATAATATCATGATTTTACGAAACTTGGCAATAGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D25476g_CDS-001

Protein length: 479 aa.
Product: Pantothenate kinase, putaive

>YALI0D25476g_CDS-001 MQQATQELKDITARSRDSPRTSALKFLHAGDIQINVEGAFIVNKDQNGRETPPDTRDIVL
PHHTAHVSHIAIDIGGSLAKIVYFSHDEPNGDTLEDVGGRLNFTVFETDKIDDMIDFLKG
LMSRLQDNHRRSSRSNERLTPDGSSIRSSSHDSTIAASPTKPQQSNMRIMATGGGAYKFY
ERLRNELGADISREDEMECLIAGLDFFITEIPEEVFCYSETNPMVFAEPRQPSIYPYLLV
NIGSGVSMIKVLGPQQFVRIGGSSLGGGTLWGLLSLLTDATSYDEMLAKAAEGDNSNVDM
LVGDIYGQDYTKIGLKATTIASSFGRVFKEIQRDRESGEGDGGDGKSGGDVDAKSEASAS
STDSASSHAPKSSRDLFKSEDISRSLLYAISNNIGQIAFLQAQIHNLQHIYFGGSYIRGH
LQTMHTLSYAINFWSQGSKQAYFLRHEGYLGAVGAFIKKQPSGWGRRNSAGELERFMQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG