YALI0D25344g

Overview

Description weakly similar to uniprot|P53628 Saccharomyces cerevisiae YNR023W (ohnolog of YCR052W) SNF12 component of SWI/SNF global transcription activator complex
Locus type CDS
Locus tag YALI0D25344g

Location

Species Yarrowia lipolytica Positions 3380698..3381906
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1209 (nuc.)
Previous locus YALI0D25322g Next locus YALI0D25366g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D25344g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D25344gYALI0D25344g_mRNA-001YALI0D25344g_CDS-001

Nucleotide sequence

 

>YALI0D25344g
ATGAACGCAATCGACAAACACTACACACAAAAGCCGACGGACAAGAATCTGTCGGCCAAA
TTCGACTCGATTCTGCCGGATACAGCGGTGTACCGGAAACTACAGGACCTCGAACGACGC
ATGGACGCGACCTTCACACGCAAGCGGCTGGACCTCGGCGACCTGCAGGCTCGTATGCTC
AAGCAGAAGAAGACGTTGCGGCTGTTTGTTTCCAACACTGCGGCGCACCAGGCGTGGCAG
ATCGACCCGGACAACATGGGTGACTTCCAGCCCCCGTCGTGGACGCTCAACATTGAGGGA
AACGTGGAGGGCGAGGACAAGCCGTTCTCTTCGTATTTTACTAGTATCTCCGTCGAGGTC
AACGGCGAGATTGTTGAGTGGCATGAACCCCAGGGCGAGCGACCTGCGCCCACAGAGGAG
CTGGCTGGCGACGTGACGGGCAAGGATGTAGGCTTCGACGTGTTCAAAATGACACGTGAG
GGCTCGGGCCAGATCCCTGCGCGAATCGTGCTCCAACTCAAGGAGTACCCCGATCGAGCG
CGTCTGTCGGAACCTCTGTCGGAAATTTTGGCGCTGGACGAGGCCTCCAAGTCTGACATC
ATCCTAGCTCTGTGGCAGTACATCAAGTTCCACGATCTGCAGCAGACCGAGGAGAAGCGA
AACATCAAGTGTGATGAGCCGCTGAGACAGCTGTTTGGACGTAACACTGTAACTTTCCCG
GAAATTATGGAGCTGATCACGCCCCATCTTCTACCCAAAGAACCCCTGGTCATCAACTAC
ACCATTGACACAGACGTGGAGAACAACCTGGGCGAAACCGTGTTTGATTTGGCACTCGAG
TTTGACGACGACATCAACGCCGAGATTGGAAAGATCACCAAGCACTGGTTCGACAACCAG
GAGGATATTTTCAAGTTGGATGAGCACATCGCGCTGATTATTCAGCAGCTCAACAACACC
AGACTGAAGAGGGAGTTCTTCAAGCAGTTTGCTGCCAACCCGTCGGACTTTCTGTCCAAA
TGGAACTCGTCACAGGCACGTGACCTCAAGTTGCTGTCTGGCGACCGAGGTTTCAACGAA
GAGGAGGTCCGAAAGTCGTCCTTTTACACAGACGAGTTCATGGGCGAGTCTGCTCATCTG
TTGTTGGCCCGACGGTAAAACACGGTGTTTAGGATTGTATTAATGGAAATAAATGTATTA
TATGGCTAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D25344g_CDS-001

Protein length: 386 aa.
Product: Conserved hypothetical protein

>YALI0D25344g_CDS-001 MNAIDKHYTQKPTDKNLSAKFDSILPDTAVYRKLQDLERRMDATFTRKRLDLGDLQARML
KQKKTLRLFVSNTAAHQAWQIDPDNMGDFQPPSWTLNIEGNVEGEDKPFSSYFTSISVEV
NGEIVEWHEPQGERPAPTEELAGDVTGKDVGFDVFKMTREGSGQIPARIVLQLKEYPDRA
RLSEPLSEILALDEASKSDIILALWQYIKFHDLQQTEEKRNIKCDEPLRQLFGRNTVTFP
EIMELITPHLLPKEPLVINYTIDTDVENNLGETVFDLALEFDDDINAEIGKITKHWFDNQ
EDIFKLDEHIALIIQQLNNTRLKREFFKQFAANPSDFLSKWNSSQARDLKLLSGDRGFNE
EEVRKSSFYTDEFMGESAHLLLARR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG