YALI0D24728g

Overview

Description weakly similar to uniprot|B8M5A1 Talaromyces stipitatus hypothetical protein TSTA_029790
Locus type CDS
Locus tag YALI0D24728g

Location

Species Yarrowia lipolytica Positions 3284153..3285563
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1411 (nuc.)
Previous locus YALI0D24673g Next locus YALI0D24739r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D24728g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D24728gYALI0D24728g_mRNA-001YALI0D24728g_CDS-001

Nucleotide sequence

 

>YALI0D24728g
ATGGACTCCATCAAACAATATCTCTACTTTGCGCTGGTGTTGGCGTTCGTGCTGTACCGC
GCAAATCAACGGGCCAACAAGGCCAGACAGGAGAGAGAAGAGACGAAACACAAACAGAAA
GAGAAAGAAAAGGCCGGCGGGGATAGCAGCGGGAAGAGCGGCGGCCACGCGACCCAAACG
CGAACCCCGGATCGCGATCCCCCCGCAACATGGAGTGTCATCGAGGCGGTTTCCGACGAC
TTTGACATTGCCACCTGTGCTCCTCGGCCCTACCGTCCGTTCAAGGCTGGCAAATACCAC
TTGACTATGGGTCTGCAAAAGTGCGACGCCAGCGACTGGATCTTGCTGGAAAACACGTAC
AAACGGCGAACGGCTTACCGCCGAAAACAGCTCAAGGAACATCCCGAGATCGCCTGTCTT
GTTCAGGAAGGACCCGAGGTCGATGCGGCTGTTCATGAGTACTACGAGTACATGTGGTAC
TATTTGAGCGAGCGGTATCCCAAATACTTCACCAAGGAGACTGTTGATGGCGTTGAATGG
TGCCATAATAGTCTGTGGGACGAAAAGTACCCCATGAGTGCCCAGAAATGTCTGGATTTG
GGGCTCGCAAAAGGTTCACGTGACTTGGCTATGATCTGTTCGTCTACCCATGAAGAGGAC
TTTCTCCTCATGACTCTGGATGAGACCCACGATCCCCCCATGTACCGCATGCGAGCAGTG
TCTTCCTGTTTCCCGGCAGGATTCAATCCAGCAGACAAGATTGGGCTGACTTTGAGAAAC
ATCCATGGGCCTGTGCCTGGATACAAGCAGCGTCTGGATCTGTCCATGAACAAGTTCTTT
GCCAAGTTCCAGGCGGGAAATTTTGTCCAGCGGCAAAACTGGGGCATTCAATGCGACGAC
GCCTTGTTTGACTATGAGAATTACGCGGGGTTTGACGCTGAGAAGGACAACGAGCCCTAT
GAGGCCCATGAGGTGGATTTCAACGAATGGGCCCTGCGGGTGGAGAGACAAGTCTTGACT
CGACTGCCCAAAACCGGAGCCATGTGTTTTGTCATCAGATGCTACACAACTCCTGTATCT
GTTATTCGAGAAGAGCCACGTGCGCCGGATCTCATTGACGCCATTGACCAACTGCCAATT
GAAGACAAGGTGTACAAGGGAGCACATGTCTGGGGTCCTGTTCTGCAGCAGTATTTGAGG
AGAGAGGTGGAGGGTAAGGGCGTTGGGGATAACCCGATTGAGAGGATTTGCTGACGAACT
CATCAACTCGGCGGAAGACGAAGCCTGGAGTTGAGTTGTGGGCGAGAGCCCAAGCTACCC
ATTTTGAATCGATGCTAGCTTTCTACGAATCCTTCTGACAGCTTTCTCTAGAGTTCCCCC
TAACTAACAAATGTATGACCGTTAGATGATC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D24728g_CDS-001

Protein length: 418 aa.
Product: Conserved hypothetical protein

>YALI0D24728g_CDS-001 MDSIKQYLYFALVLAFVLYRANQRANKARQEREETKHKQKEKEKAGGDSSGKSGGHATQT
RTPDRDPPATWSVIEAVSDDFDIATCAPRPYRPFKAGKYHLTMGLQKCDASDWILLENTY
KRRTAYRRKQLKEHPEIACLVQEGPEVDAAVHEYYEYMWYYLSERYPKYFTKETVDGVEW
CHNSLWDEKYPMSAQKCLDLGLAKGSRDLAMICSSTHEEDFLLMTLDETHDPPMYRMRAV
SSCFPAGFNPADKIGLTLRNIHGPVPGYKQRLDLSMNKFFAKFQAGNFVQRQNWGIQCDD
ALFDYENYAGFDAEKDNEPYEAHEVDFNEWALRVERQVLTRLPKTGAMCFVIRCYTTPVS
VIREEPRAPDLIDAIDQLPIEDKVYKGAHVWGPVLQQYLRREVEGKGVGDNPIERIC*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG