YALI0D24673g

Overview

Description some similarities with uniprot|Q9P7Q4 Schizosaccharomyces pombe secretory pathway protein Sec18 (predicted)
Locus type CDS
Locus tag YALI0D24673g
Pseudogene This locus may contain pseudogene(s)

Location

Species Yarrowia lipolytica Positions 3282251..3283013
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 763 (nuc.)
Previous locus YALI0D24651g Next locus YALI0D24728g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D24673g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D24673gYALI0D24673g_mRNA-001YALI0D24673g_CDS-001

Nucleotide sequence

 

>YALI0D24673g
ATAGAGGATGCGGAGCAGCTCAATAACAGTCTGGTTATCGGTGTGGCCAACCGAAAGGGT
CTGATTGATTCTGCTCTGATGCCACCTGGTCGATCCGAGGTCAAGATTGAGAGTCCCTTC
CCTTGAAGGTATCTGCAAATTCTCGAGATTCACACCGCCCCTATGACTGTTGCAGGCAAG
TTGGGCGGAAATGTGGATCTTGACGAGTTTGCCGGAGAGACTAAGAACTACCCTGGTGCC
GAGATGGAGGATCTGCTCAACTCTGCTGCTTGTTATACCTTCACTCGAAACCTCAAGATC
AAGGTGGAAGAGGCGCAAACAGGATAAGGGTGGAGAATTCATGCGGGAGGAGGTGCGTCT
CACGTTTGGTGTCTCCGAAGAGGATCATAACATTGATGACACTATCAAGAAGGGAGAGAT
ATTCATTGAGGGAGTTGGACAGGCTTCTGGTGATCGTGCTCTGACTTCTCTGCTGCTTCA
CGGCCCTGCTGGCTCTGGTAAGACTGCTCTCGCAGCTCTTATTGCCTTGCAGTCGAACTT
GCCCTTCGTGCGACTCATCTCTCTCGAAGGCCATGTTGGTATGTCCGAGACATCTAAGAT
CACTGCCATTGAGAACTGTTTCCTATCTCCTCTGTCCGTCATTGTGATTGACTCTATTGG
GATTCTCGAGTGGGTCCAGATTGGACCTCGATTCTCAACCTCTCTGCTGCAGGCCGTCGA
GACTCGGAGTCGAAAGACTCCACCCAAGGCTGCCGATTGCTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D24673g_CDS-001

Protein length: 254 aa.
Product: Conserved hypothetical protein

>YALI0D24673g_CDS-001 IEDAEQLNNSLVIGVANRKGLIDSALMPPGRSEVKIESPFP*RYLQILEIHTAPMTVAGK
LGGNVDLDEFAGETKNYPGAEMEDLLNSAACYTFTRNLKIKVEEAQTGKGGEFMREEVRL
TFGVSEEDHNIDDTIKKGEIFIEGVGQASGDRALTSLLLHGPAGSGKTALAALIALQSNL
PFVRLISLEGHVGMSETSKITAIENCFLSPLSVIVIDSIGILEWVQIGPRFSTSLLQAVE
TRSRKTPPKAADC*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG