YALI0D24651g

Overview

Description similar to uniprot|O94343 Schizosaccharomyces pombe Putative MSF transporter
Locus type CDS
Locus tag YALI0D24651g

Location

Species Yarrowia lipolytica Positions 3278448..3280271
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1824 (nuc.)
Previous locus YALI0D24629g Next locus YALI0D24673g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D24651g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D24651gYALI0D24651g_mRNA-001YALI0D24651g_CDS-001

Nucleotide sequence

 

>YALI0D24651g
ATGGACACAATCTTCCTCGATCCGGAATACATCCCGGGAACGGTCCAAATCATCGGACAG
CATGACGACGACTCGATGCTGATCAAGGACGAAAAGGGAACGGTGCTGCTTCCCCAACCC
ACCTCGTCGCCAAACGACCCGCTCAAATGGTCGTGGAGCAGAAAACTCTGGCACACTCTC
TTGGTGTGTTTCATCACCGGATTCACAGCAGCCACCTCCAACGACTCCGGAGCAGCGTCG
GACGGACTGCTGGAAGAACTGGGAGTCGGATACGACGTGCAAAACACTGCCGCCGGCGTG
CTGTTTTTGGGCATCGGCTACTGGTGTCTTTTCATCTCCCCTCTGGGCTCCCTGTACGGC
CGACGACTGCCCTATCTGCTGGGCTGCATTCTGGGTCTCATTGGCGCCCTTTGGTTTGGG
CGAATCAAAAACGTCGGCGATCTCATCTGCTCACAGCTGTTTGTGGGAGCCTCAGAGGCC
GTGGCCGAGGCGTACTCCCAGGTTTCTCTGATTGACATCTTTCACGACCACCAGTCTGGT
TCCGCCATCGGTATCTACGTGTTTGCCACATCCATCGGAACCTTTCTGGGGCCCCTGATT
GCCGGGTACATCCAGATTGGCCAGAGCTGGCGATGGGTCGGTTGGTGGGCGCTCATCATC
GGAGGAGGCATGACACTGTGTTTCTGGTTTGGCTTTGAGGAGTCGTACTTCCCCCGGAAC
CTGGTGACCGCGTCGGAACGAGGCCAGACGACTCTGGATGACACAAACGAGGCGCCCCTC
GGGGCTAAGGGCTCAGAAAAACTCGACTCCAAAGACGACTCCATTCCCGACCGCGCCTCG
TCCGGAGAGGGATCGCTCTACGAAGTGCGAAGCGCTATCCACCCGGCAGCCACCACCGAA
TCTACTAACGTGCAAACCAACCCCAAGGTGATTGGCTGGAGAGACACCCAACGGTCGTTC
CGACAACGCATCCAAATCATCACCCCAGCCCCCAACCTCAAGGGCTGGGGCATCAAACAG
TACTTCCAGCGATTGTGGACCACCATGAAGGTCTTTGGATACCCGGCAGTCATCTACTCG
GGTCTCCAATGGGGAGCCCAAGACGCCTGGCTCTCCTTCTACCTCACAACCCAGGAAGAC
ACCTACGGAGAGCCTCCTTATAACTACTCTCCAACCAGAATTGCCGTCATGAAAGTGCCG
CTCATCATCGGAGCGTCCATCGGCTGTTTCTACGGAGGCTACCTCTCCGACAAGTTTGTG
CACTGGATGGCGTCGCGACCGGCCCGGAACGGAATCCGAGAAGCCGAAGACCGACTCTGG
ATGATGCTACTCAACTGTATCATCTCCCCGCTCGGCATGTACCTGTTCGGAATCGGCACT
GGCGAGATGTGGAGCTGGCCCGTTGTCTATGTGGGCCTGGGCTTCATTGGATTTGGCTGG
GGCTGTGCTGGAGATATGTCCATGTCCTACCTGGTCGATGCCTACCCGGAAATGGTCCTG
GAAGGCATGGTTGGAGTGTCTGTCATCAACAACTCCATGGGCAGCATTTTCACCTTTGTG
TGCGACATGTGGATGGACGCCCAGGGCATCACAGACACCTACATCACCACCGGCTCCATT
TGTGCAGGCATTTTGTTTCTTACCATCCCGATGATCATTTTCGGCAAGTATTTCAGAAAG
AAGACCACCAAGCAGTATCTGGCATTTTTGAGGGAGCGAGATTCGTTGGATGAGTAATAG
AGCGAGTGCAGAAGCGGCATCTAGTTCACGACCACCAACTGGATACTCAGTTCCATGGGT
TTATTGCATTTTAATTGTTGTTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D24651g_CDS-001

Protein length: 579 aa.
Product: MSF transporter, putative

>YALI0D24651g_CDS-001 MDTIFLDPEYIPGTVQIIGQHDDDSMLIKDEKGTVLLPQPTSSPNDPLKWSWSRKLWHTL
LVCFITGFTAATSNDSGAASDGLLEELGVGYDVQNTAAGVLFLGIGYWCLFISPLGSLYG
RRLPYLLGCILGLIGALWFGRIKNVGDLICSQLFVGASEAVAEAYSQVSLIDIFHDHQSG
SAIGIYVFATSIGTFLGPLIAGYIQIGQSWRWVGWWALIIGGGMTLCFWFGFEESYFPRN
LVTASERGQTTLDDTNEAPLGAKGSEKLDSKDDSIPDRASSGEGSLYEVRSAIHPAATTE
STNVQTNPKVIGWRDTQRSFRQRIQIITPAPNLKGWGIKQYFQRLWTTMKVFGYPAVIYS
GLQWGAQDAWLSFYLTTQEDTYGEPPYNYSPTRIAVMKVPLIIGASIGCFYGGYLSDKFV
HWMASRPARNGIREAEDRLWMMLLNCIISPLGMYLFGIGTGEMWSWPVVYVGLGFIGFGW
GCAGDMSMSYLVDAYPEMVLEGMVGVSVINNSMGSIFTFVCDMWMDAQGITDTYITTGSI
CAGILFLTIPMIIFGKYFRKKTTKQYLAFLRERDSLDE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG