YALI0D24288g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0D24288g

Location

Species Yarrowia lipolytica Positions 3211005..3212285
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1281 (nuc.)
Previous locus YALI0D24282t Next locus YALI0D24299g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D24288g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D24288gYALI0D24288g_mRNA-001YALI0D24288g_CDS-001

Nucleotide sequence

 

>YALI0D24288g
ATGACACAATCATCCTTCTCGTGGCCCATGTGGGGCAACTCCAAGTCGCCCTCCTCGACA
GGTGCAACCACAAATACCGACTCTACTGCATCCCGGCCATGGTCTTGGGACGACACCAAC
AGCGCCGATACTCTCGAGTCAACATCCTTTTCCACGTCCATCGATATCAATGATACGCCG
TCATCTCCAGAATACACGGTCCTTGCCGGAGTCACCGATGGCGGCTTCCACGCCCGAAAG
TCGTCCCTCGAAGGAGATCCCGTCGAGTCTGCCATTGCCGAGTGGGAGATGGATCTCGGC
GAGAGCACTGCCAGTGATGTTACCGCAAGCGATGTCGCCAACGACGTGAGCTTCGACTCA
ACTATGTGCACTTCTGTTGATGAGTCCATGCTGAAACAGGAAGATTCGTTTGTCCTCAAC
GAACGGCCAGTCAGGGCGAAGAAGGGCCAGACGAGGCTGAAGGCAAAGGTGACAAAGCCG
GGGTCACGTGAAAACCATGTGAACGATAAGTTGGAGTCAACCTCCGAGCCCCGCGCTCTT
GTTCGAACCCGAGGATCCTCCCAGGGTCGTGCTGTTGCTCGTCCCATTGGCAAAACTCGG
TTCTCACAACGTCACTCGCCTTCCTCGTCCTCTTTGCAGCTCACACGGACCTGCATCACC
TCCGAGGCGGCCTTCCACCACCGGTTTCTGGAGTGCGAAGAGCGGCTGCATACTCTGGCC
GAAGCGTATCTTCACTCCAAGCGTCAGGACGTACCTTGGACCAACGACGCGTTGATGGAC
CACGCGTTGTTCGACTGGGCGTTTGTGTCCCGCAAGAGCGGGCTCCCGAGAGCTGCAGCT
ATTAGCAGCCTGTGTACGGCAAACGCTCTCTCCACCACCAAGCGTCCAGTGCGCTGGACA
CCCTGCGACGACAGACTCATTATGTATCTCAAGGAGATTGAAGGCCTCACGTGGAAGGAG
TCTGCGCTTATGATACGGTACCGGCACAGCTGGCAGGCCGTACAGATGCGATATCTGCGG
ACCCTATGTCGGTTGACGGGCAAGTGGACCAAGCAGGAGACCGACAAGCTGAAGAGCGTT
GTGGCCCGTGACTGGGCAGGGAGGTGGAGGCGCATTGCCACCGAGATGGGCCCGCAGTTC
CCCGCGGAGAGGGTCTACCGGCAGATGATGGGGCTGGCCGGGATGGAGGTGGATCTGGAG
AGATTGGACGGGGTGGAGGGGGAGGAGCAGGGGCCCAGTGCCCTCGGTTGGGAGGAACTG
GTGCAGCTCTACAATCGGTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D24288g_CDS-001

Protein length: 427 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0D24288g_CDS-001 MTQSSFSWPMWGNSKSPSSTGATTNTDSTASRPWSWDDTNSADTLESTSFSTSIDINDTP
SSPEYTVLAGVTDGGFHARKSSLEGDPVESAIAEWEMDLGESTASDVTASDVANDVSFDS
TMCTSVDESMLKQEDSFVLNERPVRAKKGQTRLKAKVTKPGSRENHVNDKLESTSEPRAL
VRTRGSSQGRAVARPIGKTRFSQRHSPSSSSLQLTRTCITSEAAFHHRFLECEERLHTLA
EAYLHSKRQDVPWTNDALMDHALFDWAFVSRKSGLPRAAAISSLCTANALSTTKRPVRWT
PCDDRLIMYLKEIEGLTWKESALMIRYRHSWQAVQMRYLRTLCRLTGKWTKQETDKLKSV
VARDWAGRWRRIATEMGPQFPAERVYRQMMGLAGMEVDLERLDGVEGEEQGPSALGWEEL
VQLYNR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG