YALI0D24299g

Overview

Description similar to uniprot|P78954 Schizosaccharomyces pombe Eukaryotic translation initiation factor 4E-1, CDC33 homologue
Locus type CDS
Locus tag YALI0D24299g

Location

Species Yarrowia lipolytica Positions 3215388..3217220
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1833 (nuc.)
Previous locus YALI0D24288g Next locus YALI0D24321g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D24299g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D24299gYALI0D24299g_mRNA-001YALI0D24299g_CDS-001

Nucleotide sequence

 

>YALI0D24299g
CGAGCTCTGTCTTGATCGCACAACAGTACTTGATTGGAAAGTGAGTATGTCGCAAGGGGG
TGAAGTCACGTGACAAGCGATCACGTGGTGCGCGCGATGCCATGTGGCGTTTTTTTTGCC
CGGATCGGCCCCGATTTGGCGGTGTTACACAGATGGATACACAGTCGCACAGACAGGAAA
AAGTGGTAGCACACTCAGACATGAGGGGTTGGAGATGGTAGAGAAGAGATAGGGGGAGGA
CTCGGCGATGTGATTTCGATGGTGGCGTTGATGATACTGTGAATGTGGCGACGATGTTGT
GGATGTGGTGACGAGACTGTTGATGTGATGGGGAAGACGCTGTTGATGTGGTGGGACGAC
ACTACTAAAGTGGTGGGACGACACTGCGGATGTGGCATGTCGCGTGCACTCATCGATGGT
GTGTAAGGTGAGCAGTATATGTCTCTTCGACACGTTTCGCTTCCCTGCGGTGCCTGTCTC
TGTCTTCAGTCTAAGTCTACCGTCTACACATGTTTGCTGTTACTGTTGCTGCAGTTCTGC
TGATGTCCATCTCCTCCCTCTCGTTCTGTGCAAGTGTGCCATCAATGAGCTGTCCTTATG
GCCATGACTACTAAATATCGACCTGTCTGCTCGTCTGTCGGTCGAAAATCTGTCTCCATC
AAGGGCACAATCACCATGTCTACAATGGCAATCCAGACGGATGTCTCAGTGATTTCTACA
GATATCGCCTTGCAATTGTCCCAGTCTGTGATTCCTCCAGTGCCTATGTTGTTCAGCATA
GACTTAGACGTATCACGTATCTTACATCGCCATAAACCAGCTTCTCGCTCACAACTGCCG
ATTCCGTACTAACCCAGAATGGCCGCTACTACTGACAACGTGACTGAAGCTGTCGCCAAC
CTCAACATCAAGGAGGAGGCCCCCGTTGCTTCCGAGCCTGCCGAGGTGACCGAGACAGTC
GAGGAGGAGGTGACCCCCGCGGAGCCCTTCAGCACCGTGTTCGACTCCAAGACTGAGTTT
GCCACCGTCCACAAGCTGACCACCCCCTGGACTCTGTGGTACATCAAGCCCCCTTCCCCC
GCGGTTGCCTGGCACGATCTGATCAAGGAGGTGGTGTCGTTCGACACCGTTGAGGGCTTC
TGGGCGGTGTACAACAACATCCCCAAGCTGGTGGAGCTACCCATCCGGTCGGACTATGCA
TTTTTCAGAAAGGGCATCCGGCCCGAGTGGGAGTGTGACTCCAACAAGGCCGGCGGCAAG
TGGTTCTACCAGTTCAAGCCCAAGTCTGCCAACGAGTTTGACGAGATTTGGCTCCACACG
GTGCTGTCTGTGATTGGCGAGAGCCTCGAGACCGACGAGGAGATTGCCAAGCACGAGGGC
AAGTACAACAACGTGGACGGCTCGGCCTCCAACGTGAACGGCATTTTTGTCAACATCCGA
AAGGCCGGTGTGCGGTTCAACGTCTGGACCAAGACCTCCGAGGTGACCGACGAGCTGCGC
CAGATGGGCGTCAAGATCAAGCAGGTGCTGCGTCTGCCCGAGAAGGAGGAGGTCCAGTTC
CAGTCCCATGAGGAGTCGGCCTCCAAGAACGTCAAGTCGCAGGGCAAGACCAGACTGGCG
GTTTAGCTGGAGTGAGAGATGAAAAAGGTGAGACCTAAGTTATTGAGAGGCGGGCTGCAT
TATAGTAATGTATGGCCAACGAAGGCCGCGAGAGAGCAGCATCACGAGCATCCTTAACAT
CACAAGCAAGAGCGATCTGAATGCGAATGATTGCGAGTTATGCGAGAGTGAAAGCAGCTG
TAGAAAAGTGTGGAGTAGAAAAGTGTGGAGTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D24299g_CDS-001

Protein length: 256 aa.
Product: Translation initiation factor 4E-1, CDC33 homologue, putative

>YALI0D24299g_CDS-001 MAATTDNVTEAVANLNIKEEAPVASEPAEVTETVEEEVTPAEPFSTVFDSKTEFATVHKL
TTPWTLWYIKPPSPAVAWHDLIKEVVSFDTVEGFWAVYNNIPKLVELPIRSDYAFFRKGI
RPEWECDSNKAGGKWFYQFKPKSANEFDEIWLHTVLSVIGESLETDEEIAKHEGKYNNVD
GSASNVNGIFVNIRKAGVRFNVWTKTSEVTDELRQMGVKIKQVLRLPEKEEVQFQSHEES
ASKNVKSQGKTRLAV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG