YALI0D24233g

Overview

Description similar to uniprot|B9WN76 Candida dubliniensis Putative Ca2+/H+ antiporter; fungal-specific, cation exchanger
Locus type CDS
Locus tag YALI0D24233g

Location

Species Yarrowia lipolytica Positions 3199097..3202826
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 3730 (nuc.)
Previous locus YALI0D24211g Next locus YALI0D24255r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D24233g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D24233gYALI0D24233g_mRNA-001YALI0D24233g_CDS-001

Nucleotide sequence

 

>YALI0D24233g
ATGCCCGAAAGTGACTCGACCAAGGCCAAGGGAGACGCCCAACACTCACGTGAGCCGTCA
CGTGAGTCGTTGCAGGCCCCGCAACACGACATTTACTCGTCTTCGATAGATACCATTCGC
CCGGGCGAGTTCCGCTCGGTGAGCCCTCGAACGGCGCCAAACCCCAACTCGACCGCGACC
CCCAACCCCGGTCCCAATCCTGGGCCTTCCGGATCGAGCAACCCTGGCCCTGCCGCCGTC
AAGCCCAGCCCAAACCTCACGGCGCTGTCGCAACCCTCGCCCAGTCTCAACCCCAAACAG
CCGTCGCTGGTTCTGCCCCAACCCAGATCTTCCCTAAGCCGGGGCACCTCGACCTCTCAC
GAGCGACGATACCAGTACTCCGTCGACGACGACGAGTACGAATTCGAAGCCGATCTGGAA
CGGGAGTTTCTGGAGGGATATGCAAAGGCCATCAAGGACCAGGAGCGAAAACGGCGACGG
AAAAAGAGTCACGTGCCCGGAGGAGGCAGCATCAGCGGCGGATCACGTGAGCGCGACGCG
AGCCGTGGCCACTCGCTCAGTCACGTACGTTCTCGGGACTCGGTGCCGCGGGAGTCGCCG
TCACCGATCATTAAGCAGGACTTCAACCCGGCTTACTCAGACCACGATGCTGACCAATGC
GACGTCGACGGGGACCACGACTTGCACGACCCCGCGGGCAGCCACGTGACGCACGCCGAC
GGGGACCACGCTGACTCAACGGAAATTGCTGACTCAGCCGGCCTCGACGACGACGACGAC
GCCGACGCAGATGACTCAGCCGACGCAGATGACTCAGCCGACGACAACGCGTCGGTCCTC
TCCAACGAGTCCTTCACTCTCAAGGAGCGGCAGGCCGCCATCAACACCACCCACCCATTC
GGAATCCGAATCTGGAAACCCGCAATTTACAAAAAAAACCGGTCTGTGCAGGCCCAGGCG
GAAGGCGATATTCACATGACTCCGGGAAAGACGGTGGGATGGCGGATTTTCTTAGGTAAT
GCGCTGTGGACCTTGTCGTTCGGCCTGTTGCTCTACATGGTTTGTGGGCTAGGGTTTATT
ACGTGCTCGCTGTTTTTCTGGTCCAATTCCGCCCGCCAGTACGGCCGTGTCTTACATAAG
ACGGGCTTCTATCTTCTCTATCCGTTTGGGCAGTTTGTGCAGCTCGCGGCCGACGAAAAC
TATCTGCATGAGGATGAGGGCGAGGGTAGGACTCTGGGAGAGTATGAGCGGTGGCAGGCG
GGTGATTTGGAGCATGGCCGGCTCTTTTTTGGACCGGATTCGAACCATGGCCACCCTACC
CAGGGAACCAACCCTACCTCTCACCCTAACCACCCTAACCACCACGACCCCAGCTCTGGC
GCCCACGTAGACCCCGTGAGAACCCCCCTGCTGGGCCGCAACCGGTCGTCGCTGTCGTCC
GCGTCCGAAGACTCGCTCGGAGAAGACTCGGAAACCGGCGTCTCACGTAAGCGACGGTTC
TTTGGCCGGGGCGAATGGAATCTCGGCCGAATTCTCTTCTACACGTGGTTTTACGTAATC
ATCACCCCTGTCATCTACGCCGTCTCCCTCATCTGCTGGTTCCTCGTCTTTCTCATCCCC
ATGGGCAAGGTGACTAATGTGCTCTGCTACCATTTGCGACGGCATCCATTAGCCCTCAAG
TTCAAGTCCGACTCGCAATATTATGAGCTCAACGGCTCCGGCGACGGCTCCGGGGCCATT
CTGCTGTGCACATACCGCGCCTTTGGCTGGAAGTATTACAAATACACCATTGACGGCACC
AACATTTTTTTCATCAATCTCATTGGCGTGGTGTTTTTCGGCATCTTTTCAAACTACTTT
CTACGGCTCCACCTGGGACTCGACCTGCTAATTACTCAGCCGCTCTTCATCTTCTTGGTC
AGCTTAGTCAGCGTCATCCCCCTCGCCTACTTCATTGGCCAGGCCGTCGCCTCCATCTCC
GCACAGACCTCCATGGGAATGGGCGCCGCCATTAACGCCTTTTTCTCCACTATTGTCGAG
GTTTTTCTCTACTGTGTCGCCCTACAACAGGGTAAGTCAGCCCTGGTGGAGGGCAGTATC
ATTGGAAGCATTTTGGCCGGCGTCTTGCTGTTGCCAGGCCTCAGTATGTGCACGGGAGCG
ATCAAGCGCAAGACTCAGCGGTACAATCCCAAGTCTGCGGGCGTTTCGTCCACCATGTTG
TTGTTTGCGATTCTGGGCACGTTTGCGCCGACGTTTTTCTACCAGATTCATGGGTCATAT
GAGCTGCGGTGCGATGGCGAGTGCGAGGGTCCTAATCTCATGATGGGTCGCAACCTGATT
AGTCATGCTGGGTCAGCGCTCGCAAACGGCCAGCAGGTGCTTGCTGAGTCAGCCACCGCC
GCTGCCAGCTTCTGCTCGCGCTGCCAATTCTTCCAGGTCCCGCTCGTCTACGACGACCTC
TATCAAAAGGCTCTCAAGCCGCTTTCCGGCATCTGTGCCATTCTGCTGTTTGTGTCTTAC
ATAATCGGGCTGTGGTTCACTCTGCGGACCCACGCGGCCATGATTTGGCAGACGCCGATT
CACGAGAAAAAGGAGGTGGTCCAGGTTAACCCCAACCCTGGTGCTGGGGGCCGGAGTTCT
TCCGTCGCCACTCCGGTGCATCGCGCCACTCCGGCTACCATTCTCGACGACCCCGCCGGT
TTGAAGCATCGTCCGGGCACCAACCCGGGACATCCCAACTCTGGTAACCCCAACCCTGGC
AACCCCAACCCCAACCCTGGTAACCCCAACCCTGGCTCTGGTCCAACCGTCACCCTGGCA
ACTCCGCTCGTGGTCTCCGCCCCCGTCGAAGAGGCCCCCTCGGGACACAGCCCTGACGCC
AACTGGTCACGTTCCAAGTCCACCTTCATTCTGCTCTCGGCCACTCTGCTCTATGCTGTG
GTTGCCGAAATGCTGGTAGATACCGTCGATGTAGTTCTGGAGAACGCGGCGATCGGCGAA
AAGTTGCTTGGAATCACCATTTTCGCCCTCGTGCCCAACACCACCGAGTTTCTCAACGCC
ATTTCGTTCGCCATGGGTGGCAATATCGCGCTGTCGATGGAAATCGGCTCCGCCTACGCC
CTCCAGGTCTGTCTGCTGCAAATCCCGGCGCTGGTGCTCTACTCCATGTGGAACAACAAT
GTCGACATGGACACGGCGCACATGTTCACTCTCATTTTCCCGCGGTGGGATCTGTTTGTG
GTGATGATCTGTGTCTTTCTGTTTTCGTACATTTACGCCGAGGGCAAAAGCAACTACTTC
AAGGGCTCCATTTTGGTGCTTGCGTGGTGCGTGGTCATGGTGGGCTTCTATTTCGACGGA
GTCGTGTCTGAAGATGGATTTGGCGATTCTCCGGGAATGCTGAGTGCCTTGTTGCTGCCC
CAGAGAATGGTTAGATAGCTAGAAAAATGATACACAGATTTGATTTGTGCATGTAGTCAG
ATGTAGTCACGATGGAAGTGGGTACTACACACTCACGTGATGGGAAATGACGCGAAGAAT
ACGACTTTGAACTTGCCGAGTTGATATCCCCACTCCTCCACCCTTAGCCAACTCAACTGA
GAATCTGAATCTTTGCCCGATCGAACTCAAAAATTCGGTCACGTGATCACACAGATTATG
GGGAATACAGCTCTCTGCTTCGATTATGGCTACAGTCTGTGATTTCTCTTACTAATCAAT
TCCTCATCTC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D24233g_CDS-001

Protein length: 1146 aa.
Product: Ca2+/H+ antiporter, putative

>YALI0D24233g_CDS-001 MPESDSTKAKGDAQHSREPSRESLQAPQHDIYSSSIDTIRPGEFRSVSPRTAPNPNSTAT
PNPGPNPGPSGSSNPGPAAVKPSPNLTALSQPSPSLNPKQPSLVLPQPRSSLSRGTSTSH
ERRYQYSVDDDEYEFEADLEREFLEGYAKAIKDQERKRRRKKSHVPGGGSISGGSRERDA
SRGHSLSHVRSRDSVPRESPSPIIKQDFNPAYSDHDADQCDVDGDHDLHDPAGSHVTHAD
GDHADSTEIADSAGLDDDDDADADDSADADDSADDNASVLSNESFTLKERQAAINTTHPF
GIRIWKPAIYKKNRSVQAQAEGDIHMTPGKTVGWRIFLGNALWTLSFGLLLYMVCGLGFI
TCSLFFWSNSARQYGRVLHKTGFYLLYPFGQFVQLAADENYLHEDEGEGRTLGEYERWQA
GDLEHGRLFFGPDSNHGHPTQGTNPTSHPNHPNHHDPSSGAHVDPVRTPLLGRNRSSLSS
ASEDSLGEDSETGVSRKRRFFGRGEWNLGRILFYTWFYVIITPVIYAVSLICWFLVFLIP
MGKVTNVLCYHLRRHPLALKFKSDSQYYELNGSGDGSGAILLCTYRAFGWKYYKYTIDGT
NIFFINLIGVVFFGIFSNYFLRLHLGLDLLITQPLFIFLVSLVSVIPLAYFIGQAVASIS
AQTSMGMGAAINAFFSTIVEVFLYCVALQQGKSALVEGSIIGSILAGVLLLPGLSMCTGA
IKRKTQRYNPKSAGVSSTMLLFAILGTFAPTFFYQIHGSYELRCDGECEGPNLMMGRNLI
SHAGSALANGQQVLAESATAAASFCSRCQFFQVPLVYDDLYQKALKPLSGICAILLFVSY
IIGLWFTLRTHAAMIWQTPIHEKKEVVQVNPNPGAGGRSSSVATPVHRATPATILDDPAG
LKHRPGTNPGHPNSGNPNPGNPNPNPGNPNPGSGPTVTLATPLVVSAPVEEAPSGHSPDA
NWSRSKSTFILLSATLLYAVVAEMLVDTVDVVLENAAIGEKLLGITIFALVPNTTEFLNA
ISFAMGGNIALSMEIGSAYALQVCLLQIPALVLYSMWNNNVDMDTAHMFTLIFPRWDLFV
VMICVFLFSYIYAEGKSNYFKGSILVLAWCVVMVGFYFDGVVSEDGFGDSPGMLSALLLP
QRMVR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG