YALI0D24211g

Overview

Description similar to uniprot|P53874 Saccharomyces cerevisiae YNL186W UBP10 Ubiquitin-specific protease that deubiquitinates ubiquitin-protein moieties
Locus type CDS
Locus tag YALI0D24211g

Location

Species Yarrowia lipolytica Positions 3196971..3198465
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1495 (nuc.)
Previous locus YALI0D24189g Next locus YALI0D24233g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D24211g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D24211gYALI0D24211g_mRNA-001YALI0D24211g_CDS-001

Nucleotide sequence

 

>YALI0D24211g
ATGACCTCCGTGATGAAACGCCAAAATGGAGGCGGGAACCCGTTCCAACAGCACCGACTG
CTGACTCAGATCAAAGACAAGCCAATCAGCTTTGTGCGTGCCAAAAACCCGGAGCCAGTC
GCTATCAAACCCGCGTCATACATTCTCATCAAGCCCAAGCAAAGAGAAGAGGAGGACACA
AGCCCTGGAACAACGTTGTCCGCCGCCACTCCGACCAACTTCATCCCTCTGAGCGCCACA
TTGGATCCTGGATCGCGCTCACCCAGCAAGATTCAAAAGGCGTGGAAGAAGGGTACTCCC
TCGCCGGCTGGTCTCATCAACCAGGGAGTCACGTGCTACATGAACTCGGCGGTGCAGCTG
CTCATGCACATGCCCGCCATGAGCAACTACCTCGCTGATATTCTGCTGGCCAAAAAGTAC
CCGGGGTCCGTGACTCAGGTGTTTGCCCAGCTTTACGGCAAGCTGTTTGGCGGTAAGAAG
AACATCTTCCCTCGCCAACTCATCGGCCGACTCGACGACATCAACTGCATGATGTCCGAA
TGGAACCAGGAAGATGCTCACGAGTACTTCATGTCGCTCATGAGCCGGCTGCAGGAAGAC
TCCACCCCCAAAGGCGAGAAGCTCAACAGCTCCGTCATTTACGATATGTTTGGAGGCAAC
CTGGAGCAGGTGGTAGTTTGTGGAGGCTGTGGCAACGAGTCCGTGACCAAGCAGGACTTT
TACGACCTCTCGGTCAACCTGGATGAGAAGAAACCCGAGGGACGAATCTCTCTCAAACGA
TGCATCACTCGGTTCTTTGAGGAGGAGCAGATCCAGAAGAAGGACGGATACAAGTGCGAC
GAGTGCCAAAAGACAACCAGCGCCAAGAAAACCTCGCGAATCCACGAGTTCCCGGAACAC
CTCGTGGTCCACGTGAAACGGTTCAAGTTTGTCAACGACCAGCCCCGCAAGATGGGCGCG
CCGTTGGATTACCCGGCCGACCTCGATCTGGGCCACTACTCACGGGACAAGCAGCGGGCC
GGTGTGGTGCCGTACAAGCTCATTGGTGTCATTGCCCACTGTGGCCGAACAACCGGCTCG
GGCCATTATATTGCTCACGTGAGACAGCCCAACGGCAAGTGGGCCACCTATGATGACGAT
CTCATTGAGCCGCTGTCGGAGAAAAAGGCGCTCAAGGAGGAGGATGCGTACATGCTCATG
TATCAGCGTCTGACGCCGCAGGCGTCCAAGTCGAAGTCGGCGTCTGGCCCGAAATCCGTC
GCCATGGGAACACCAAAGGCTGCTGGCAAGGTGACAAAGCCCGTGGTGAAGACTGGCAAG
GGGCAGCGAAAGATGGCCGATATTGACAACATTTTTGCATCTGCGAAGCGCAAGAAGAAC
TCGGGCTTTGTTTAGAGAGTAGCCACGGAGAGGTAGCGGGAAATGAATCATGGAGACTTC
CAGGAGAAGCCTCAGAGGACTCACACATAGACAATAGACGTTTTGCACGAGTGAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D24211g_CDS-001

Protein length: 465 aa.
Product: Ubiquitin-specific protease, deubiquitinates Ub- protein moieties, putative

>YALI0D24211g_CDS-001 MTSVMKRQNGGGNPFQQHRLLTQIKDKPISFVRAKNPEPVAIKPASYILIKPKQREEEDT
SPGTTLSAATPTNFIPLSATLDPGSRSPSKIQKAWKKGTPSPAGLINQGVTCYMNSAVQL
LMHMPAMSNYLADILLAKKYPGSVTQVFAQLYGKLFGGKKNIFPRQLIGRLDDINCMMSE
WNQEDAHEYFMSLMSRLQEDSTPKGEKLNSSVIYDMFGGNLEQVVVCGGCGNESVTKQDF
YDLSVNLDEKKPEGRISLKRCITRFFEEEQIQKKDGYKCDECQKTTSAKKTSRIHEFPEH
LVVHVKRFKFVNDQPRKMGAPLDYPADLDLGHYSRDKQRAGVVPYKLIGVIAHCGRTTGS
GHYIAHVRQPNGKWATYDDDLIEPLSEKKALKEEDAYMLMYQRLTPQASKSKSASGPKSV
AMGTPKAAGKVTKPVVKTGKGQRKMADIDNIFASAKRKKNSGFV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG