YALI0D23947g

Overview

Description some similarities with uniprot|P25386 Saccharomyces cerevisiae YDL058w USO1 intracellular protein transport protein
Locus type CDS
Locus tag YALI0D23947g

Location

Species Yarrowia lipolytica Positions 3129499..3131738
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 2240 (nuc.)
Previous locus YALI0D23925g Next locus YALI0D23969g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D23947g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D23947gYALI0D23947g_mRNA-001YALI0D23947g_CDS-001

Nucleotide sequence

 

>YALI0D23947g
ATGAGCAAAGCCGTGAAAATCATTGCCGGCGCCGCCGCCGCTGGAGGTGCCTACTACCTT
TACCAGGCCAATGGCGACGCCCAGAAGGCCAAGCTGCTCGCCCAGCGAGACGCCAACACC
GTCACCTCCAAGGCCGGCGTGACCGCCCCCAACGACCACCTCGGAGAGTACTACGGCAAG
AAGCTGGACCAGAAGGTTGCCGGAGTCCGGGAGTCTGTTCAGGACAACCAGTCGCTGGTG
GAGAAGCAGCTTGCCAACGCCAAGGAGAACGCCATTGAGACTGTCAACGAGTGGGCCAAG
ACCACCGATCAGTCTCTGGCCACCACCAAGGCCGACGTCAAGGCCAAGGCCAACGAGATT
TCCACCTCTGCCAACCAGGAGTGGAAGAACGTCAAGGGAAACCTGCAGAACACCAAGGAG
GCCGCTCAGGACAAGATCGACGATGCTTCTTCTGCAATCAATGACCAGGCCACTGACGCC
GAGAAGAAGGCAAAGAAGTCGTGGTTCGGCTTCACCAACTACGCAGATGAGGCTAAGGAG
GACGCCAAGAAGAAGGCCGGCGAGGTCTCTACTGAGGCCCAGCAGGGTCTGGCCAATGTC
AAGGAGAACATCCAGGGCGCCCAGGATGCGGCCCAGGACAAGATCAACACTGCCACCAAG
GCCGTTTCCGACGAGGCCGACCAGGCCAAGAAGTCCGCCAAGTCCTCGTGGTTTGGCCTC
AAGGACGACGCTGCTAAGGTCAAGGAGCAGGCTGAGGACAAGGCCAACGAGCTCTCCCGA
ACTGTCTCCAACAAATCTCAGGAGGCTGTTGATGGCGCCAAGGACTCGTGGTTCTCCCTC
AAGTCTTCTGCTCAGGACGCCAAGGATGATGCCGTGAAGAAGGCCCAGGATGCTGGTCAG
ACCGTCCAGGACAAGGCCCACGAGGCCGACAAGGCTGCCAAGGACTCTTGGTTCTCTCTC
AAGTCCGACGCCCAACAGGCTAAGGATGATGCTGTAAAGAAGGCCCAGGAAGCCGGCCAG
ACCGTCCAGGACAAGGCTGCCGAGGCCGACAAGGCTGCCAAGGACTCGTGGTTCTCCCTC
AAGTCGTCTGCTACTGATGCCAAGGACCAGGCTGTCGAAAAGGCCCAGGAGACCGGCCAG
CACATCCACGACAAGGCCCAGGAAGCTGATAAGGCTGCTAAGGACTCGTGGTTCTCTTTC
AAGTCCTCCGCCGCCGATGCCAAGGACGATGCTGTCAACAAGGCCAATGAGGTTGGCCAG
ACTGTTCAGGATAAGGCCAACGAGGCCGATGCCGCCGCCAAGAAGTCGTGGTTCTCTCTC
AAGTCCGACGCGCAAAAGGCCAAGGACGATGCAGTGGACAAGGCCAACGAGGTTGGCCAG
ACTGTTCAGGACAAGGCTGCCGAGGCTGACAAGGCCGCCAAGGATAACTGGAACTCGCTC
AAGAAGGATGCTTCTAAGGCCCAGGACGACGCGTACGAGACCTACAAGGGCTACTCTGAC
GCTGCTGTCAAGAAGGGTAAGGACCTGGACACCCAGGCCCGACAGTACTGGGAATCTCTC
AAGGCCGACGTGGAGAAGGCTTCTAATGACGCCTCCAAGAAGGTTGACCAATTGACCCAG
GACGCGTCCGACCAGGCCAAGTCGCTCGATAAGTCTGCCAAGAAGGGATGGTTCTCTTTC
AAGTCCGACACCGAGAAGGCCGTCGACGACTCGCAGAAGTGGCTCGAGGGTGCTTCTGAG
TCGGCCATCCAGAAGGGCAAGGAGCTCGATGCTGAAGCTCAGACTTACTGGGACTCTCTC
AAGAAGGATGCCGAGAAGGCCTGGAACGATGCCGAAGCCAAGGCAAATGAGCTGGGCCAG
ACTCTGTCCAACAAGTCCGAGGAGTTTGACAAGGCTGCCAACGAGACCTGGAACAACCTC
AAGTCGTCTGTCAACGAGTTCCAGTCCCAGGGCGAGCAGTTTGCCAAGGACGTTGACAAC
GCTGCTGCCGAAAAGTGGAGTGACGCCAAGGACAAGGGCTCCGATCTCCGAGCCGACGCT
AACAAGAAGTGGAACCAGGCTATGGATAAGACCGCCGAGACTGCCAAGGAGAACAAGGGA
CTGGTCAACTCCGTCTTTGGAAAGTAAGGCAGCACTGGAGGTGATAATTGCGTAGCAAAG
GCCACCGACCCTCATTTGGCAAGGTTGATTGACAACTGATGCCGACCACATAAAGTATTC
ATTGATTGTTTTTCGAATAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D23947g_CDS-001

Protein length: 709 aa.
Product: Conserved hypothetical protein

>YALI0D23947g_CDS-001 MSKAVKIIAGAAAAGGAYYLYQANGDAQKAKLLAQRDANTVTSKAGVTAPNDHLGEYYGK
KLDQKVAGVRESVQDNQSLVEKQLANAKENAIETVNEWAKTTDQSLATTKADVKAKANEI
STSANQEWKNVKGNLQNTKEAAQDKIDDASSAINDQATDAEKKAKKSWFGFTNYADEAKE
DAKKKAGEVSTEAQQGLANVKENIQGAQDAAQDKINTATKAVSDEADQAKKSAKSSWFGL
KDDAAKVKEQAEDKANELSRTVSNKSQEAVDGAKDSWFSLKSSAQDAKDDAVKKAQDAGQ
TVQDKAHEADKAAKDSWFSLKSDAQQAKDDAVKKAQEAGQTVQDKAAEADKAAKDSWFSL
KSSATDAKDQAVEKAQETGQHIHDKAQEADKAAKDSWFSFKSSAADAKDDAVNKANEVGQ
TVQDKANEADAAAKKSWFSLKSDAQKAKDDAVDKANEVGQTVQDKAAEADKAAKDNWNSL
KKDASKAQDDAYETYKGYSDAAVKKGKDLDTQARQYWESLKADVEKASNDASKKVDQLTQ
DASDQAKSLDKSAKKGWFSFKSDTEKAVDDSQKWLEGASESAIQKGKELDAEAQTYWDSL
KKDAEKAWNDAEAKANELGQTLSNKSEEFDKAANETWNNLKSSVNEFQSQGEQFAKDVDN
AAAEKWSDAKDKGSDLRADANKKWNQAMDKTAETAKENKGLVNSVFGK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG