YALI0D23727g

Overview

Description weakly similar to uniprot|P08640 Saccharomyces cerevisiae FLO11 MUC1 STA4 YIR019C GPI-anchored cell surface glycoprotein (flocculin)
Locus type CDS
Locus tag YALI0D23727g

Location

Species Yarrowia lipolytica Positions 3086649..3089720
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 3072 (nuc.)
Previous locus YALI0D23705g Next locus YALI0D23738g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D23727g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D23727gYALI0D23727g_mRNA-001YALI0D23727g_CDS-001

Nucleotide sequence

 

>YALI0D23727g
ATGTGCTCTTCTTCTCTGACCACCACCACTTGTCACGGCCCCCGAAACCCGCCCACAATG
GTCAGCATGCGCTGGAGAAAAGAACCGCCGTCTCCGGACCTTCCCGACCATGATTCCAGT
GAGTATGAGACCCCACAGACCCTGCTAGCTACAGTGGGCGATGCTAACATGGTGTGACAA
CCCGGACACAGAGATGATGTGGTACAGACAATCGACACAAGAGCATGGTGACGCTGCAAC
CGACACTGAAACCAAGTCCTCGACATGTGCATCTACCCACCAAACAACGCCAGCACATAT
ATAGTAGCGGTGCTGCCATTTCAGTTGTGATTGTGTTTTTTTTCTTCTTTCCTCCCGCCG
TCAAATCAACGCCACGGCTAAGCTCCCGCTTATGGTTTTTGCCTTTAGGCCAGCTGACCT
GCTGACCATGTATCTGCATGCACGTTGGGACTAGCCAGAAAGTGGTAAGACGACAATAAT
CCTATAGATACGGCATTGACGACGAGTTCTACCAACGACATTCGCACACCTCCACAAGTC
GACACAAAAGCTCCACATCCACAGCAACAGCACACACACACATACACTGCATATTACTGC
ATACTGCATCTCACACAGCATCGCCACCACAGCACACATCTAGTCTCTGTATCCACCACC
ACCACCACCACCACCACCACCACCACACCACAACCCCCTCTCTAACACAGACGAACCTCT
GTCTACAGAAGAACTGGCGACCCTGGACCATGGACTAGGAGCCTCACACCACGCATATCC
CACGCCGTCATCCAACCCGTCTCGAGACCAGCTCACCAGCAACAACAAGACCCCCCACAC
CATCTACTCGGTCCCCAACGCTTCCGGCTCTCTCACGGTCAACTCCCTGCTGTCAGTCCG
AGCCCCCGAAACAGTCACCAAACGCAAGTCGCAAAACTCGCTCGCCAAGTCCTTCCGTAG
GGTTTCTTCCGCAGTGTCGTTGTCAAAAGGAGACAAGGAACGGTCGTCTTCGTCAGCGTC
TGCAGCAGCTTCAGCATCAGATACCTCTCTGAGTTCTCCTACGTACACAAACGGAAGCGC
AAACGGCTCCAGCAGTCGAACCAACCTTGTCGGTGTACCTGAAACAAAACCCAAGAGTAG
ACAAAGCTCTCAAGTGAACATTCCTCCTGTTCCTCCGTTGCCCAGCAGTAGCGGTAGCAG
TATTAACCTGAACGGTAACCAAGGCAGCAGCAACATCAATAGCAGCAGCACCTACAACGG
CTACCTCAACCCCATCTACAGCCACACGTCCGACATTTCGCCCAATACTTCGACAGCAAA
CATCCCCACAATTATTCATCCAAACTCGGACACAAACACAGGCGCAAACCCGATTCGACC
CACTCACTCTAACATGTCGTCTCATAGTGTCATCAGTGCACTTAGCAATGCTAACGAGAG
TGTCGACTCGTTCCAGTCAGTCACCCAAGACTTTTCCGAGGTGGTTCTTGTGCCGACCAA
CAAGAGTAACGGCACTTCTCCGCTCCCCACTTCTGCTTCTCAATTTGCTCGGTCGGTTAA
CTCAACCAGTTCGGCCAACACAAGTCCCGTCAAGGCAAGTCCGGTGAAGCAAGAGCCGCA
CAAGCAGTACCAGGGCCAGCCTATCCCCCAGCTTCAATTTCAGGCCGGACAATTTCATGC
TCGACAGTCTCATCAGACTCAGCAGCCTCGAGAACCTCAATTTGAGCCTGCCCACCCACA
GGTCCCGTTGGCCCAGCAGCTCCAGGATGCCCATCAGCCTGCTCCTGTGAATACCGTCCA
GGAGAAGGACCGTGATATAAACGGAGTCAACAGCGCCGACGACGACTCAGTGTCAGTCGA
TTCTCCTGTCGATGACGATCCTGCAGTGCAGTCTGCAGTTGAGTCTGTCCAGTCGCGTGT
CGGAGAGTCGCAGCAAACCAGGGTTCCTCAGTCACTAGCACAGACTCAGCCATCGCTGGC
ACAATCTCTGGGCCAGACTAACAACCAGGCCATTCCCGTCCGATCGGCCAATAAGGAGTT
TATGTCTTCGGTAGCCCCTGCGGCTCCCACCGTAACAGGCTCCTCTTCGCGACCCTCTCT
GGCTGCAGCAATGAGGGGTGGTCTAAGTGACACACCTGCGATCCCCATGGCTGCCGCGAC
CACCGCAGTTTCGTCCATGTCGCCCAAGAGCCAGAACTCGATGACCGAGTCTGTTTCGGC
TCTTTCCTCGCCTGCCTCTTCCATGATCTTTGAACGCAACGTGCAGGAGTTTTCTGTGGC
TGCTACGAGCGCCGGAGCATCATCGTCCAAGATCTGGCACAACCACGACAATACCCACTA
CCACGGCGAAGATAGGGTTGCTCCGGCTCTGGATGCGTCCACGGAGGCCATCATCAACTC
CAAGGTGAATCCCGAGGACATTGATGTCATTTCGCTGCGTAGACCGTCGTCAATTCGAGC
CAGATCACCCACAGAGGCTTCTCTGAACTCTCTGTGGTCTCCTGGCAGCCCCACAATGCT
GCAGGATGCCTCCTCGGGCGGTCCTCGAACACGCAACAATTCCATGAGCGTACATCCACT
GACTGCGAGCCATACGGGTGGTTCCCTATCTCCCGATAAACTCAACGGAGGAGACGGACG
GCAGGTGCTGTCGTTCTGCTCGTTTGCTGATGTCGTTCATACAGAAAACGAGGAGACTAC
GGCTTCTAGTGATAGACTGGGCCGGTTTGATACGCGGTCTCAGTCTGCGCTGAGATCTCC
TTCTCCTCTGATGCGTCAGCACCATCCTGTCAGCCCCTCTATGGCGGAGTCTGTGGTGGC
AGATTTGAAGTTGACGATCCCGCCGTCCCGAAGTGCCACTGTGGATTCCTTGGACTCGGA
GAGCCCGATTGTGGTTTCCTCGTTTGGAGAGACGATTAGGAGGAGGACGAGTGAGCTGGG
GTTGTAGGCACGGGCCTAGCGAGCTGTCTGCAGCTGATTTACTTTCTAGTCCTGCTCGCA
TGTTCCCCTTCTTCTGGACCTTTGATTCCGTAATCCGTTTAATTAGCTTATTTATTCTGT
GAAATTTGACCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D23727g_CDS-001

Protein length: 785 aa.
Product: Conserved hypothetical protein

>YALI0D23727g_CDS-001 MCSSSLTTTTCHGPRNPPTMVSMRWRKEPPSPDLPDHDSNEPLSTEELATLDHGLGASHH
AYPTPSSNPSRDQLTSNNKTPHTIYSVPNASGSLTVNSLLSVRAPETVTKRKSQNSLAKS
FRRVSSAVSLSKGDKERSSSSASAAASASDTSLSSPTYTNGSANGSSSRTNLVGVPETKP
KSRQSSQVNIPPVPPLPSSSGSSINLNGNQGSSNINSSSTYNGYLNPIYSHTSDISPNTS
TANIPTIIHPNSDTNTGANPIRPTHSNMSSHSVISALSNANESVDSFQSVTQDFSEVVLV
PTNKSNGTSPLPTSASQFARSVNSTSSANTSPVKASPVKQEPHKQYQGQPIPQLQFQAGQ
FHARQSHQTQQPREPQFEPAHPQVPLAQQLQDAHQPAPVNTVQEKDRDINGVNSADDDSV
SVDSPVDDDPAVQSAVESVQSRVGESQQTRVPQSLAQTQPSLAQSLGQTNNQAIPVRSAN
KEFMSSVAPAAPTVTGSSSRPSLAAAMRGGLSDTPAIPMAAATTAVSSMSPKSQNSMTES
VSALSSPASSMIFERNVQEFSVAATSAGASSSKIWHNHDNTHYHGEDRVAPALDASTEAI
INSKVNPEDIDVISLRRPSSIRARSPTEASLNSLWSPGSPTMLQDASSGGPRTRNNSMSV
HPLTASHTGGSLSPDKLNGGDGRQVLSFCSFADVVHTENEETTASSDRLGRFDTRSQSAL
RSPSPLMRQHHPVSPSMAESVVADLKLTIPPSRSATVDSLDSESPIVVSSFGETIRRRTS
ELGL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG