YALI0D23661g

Overview

Description similar to uniprot|P53942 Saccharomyces cerevisiae YNL072w RNH35 RNase H(35), a 35 kDa ribonuclease H
Locus type CDS
Locus tag YALI0D23661g

Location

Species Yarrowia lipolytica Positions 3075509..3076650
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1142 (nuc.)
Previous locus YALI0D23639g Next locus YALI0D23683g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D23661g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D23661gYALI0D23661g_mRNA-001YALI0D23661g_CDS-001

Nucleotide sequence

 

>YALI0D23661g
ATGACTGTCGACACGCCATTTGAAGAGTTTATGCCGCCTTCTGTGCCCCAAAAGAAAACT
CACACAACTCACACGCACTACAGTAACGTTCCTCATGGTGTTTCACGTGACCCCCATAAA
CCGTGCATTCTTGGAGTTGATGAAGCCGGACGAGGACCGGTACTGGGATCCATGGTCTAC
GGCCTTGCCTACTGTACCAAGGAGTTTGCCGACGAGGAGCTATCGAAAACGGGGTTCGCC
GACTCCAAGACTTTGACGGCCGAAAAACGAAGCGCTCTGATGCGCGAAATCTGCTGTGAT
GAGACTCTGGTTGAGCATCTGGGGTGGTGCACTACGTCTATGACTGCTCAGGACATTTCG
TCGGCCATGTTGCGACCCATGTCTCGTGGTGTGTACAACCTGAACGACCAGGCACACGAT
ACAACTATGGCTTTGATCCAGGGTGTGCTGGATCGAGGTGTTCTTCTGACAGAGGCGTAC
ATTGATACAGTGGGACCCCCCGCCAGTTACACGGCCAAGCTGAGCAAGCAGTTCCCCCAC
ATCAAGTTCACTGTCACCAAGAAGGCCGACTCGCTGTTCCCCATTGTTTCTGCGGCCTCC
ATTTGTGCCAAAGTGACCCGTGACATGGATCTCAAGTCGCAAGATCTCAGTGAGGGCACA
TGGGGCTCGGGGTACCCATCTGACCCCAAAACGTCTGTCTGGCTCAAGAGTCACGTGGAC
CAGGTGTTTGGATGGATGCCTGTGGTGCGGTTCTCCTGGCAGACAGCCAAGGATCTGGTA
GAGAAGGAAGAAAAGGGAGGTGTGGAATGTGTTTGGGCCGATGATCTCAAGAGAGACTCA
AAGAGCGTAGAGGCGTACTTTCGAGCTGCTGCAAAAGACAAGACAAAGAGTAAGCTGGTG
GTGAGTAGTGAGTGGTATGGAATGAGTGTCGGAAGCGATGTCTTTTAATGTTCGGATGAA
ACGAAGCAGACTGTCCGAACCCAGCAGACTCAAAGGCATGAACGGGTACTCGCTTCAATG
CAAGAGGCCCGTTCTGAGGTCTCACCAACCAGCATTACTGGACTGCCGTCCAAGAACACA
ATGTGAACTGCTGCATATCTTTCAAGACGATAAATTATCGAGAATCAATCATCAGATACT
GT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D23661g_CDS-001

Protein length: 316 aa.
Product: Ribonuclease H2 catalytic subunit, putative

>YALI0D23661g_CDS-001 MTVDTPFEEFMPPSVPQKKTHTTHTHYSNVPHGVSRDPHKPCILGVDEAGRGPVLGSMVY
GLAYCTKEFADEELSKTGFADSKTLTAEKRSALMREICCDETLVEHLGWCTTSMTAQDIS
SAMLRPMSRGVYNLNDQAHDTTMALIQGVLDRGVLLTEAYIDTVGPPASYTAKLSKQFPH
IKFTVTKKADSLFPIVSAASICAKVTRDMDLKSQDLSEGTWGSGYPSDPKTSVWLKSHVD
QVFGWMPVVRFSWQTAKDLVEKEEKGGVECVWADDLKRDSKSVEAYFRAAAKDKTKSKLV
VSSEWYGMSVGSDVF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG