YALI0D23551g

Overview

Description similar to uniprot|Q05942 Saccharomyces cerevisiae YLR221C RSA3 Protein with a likely role in ribosomal maturation
Locus type CDS
Locus tag YALI0D23551g

Location

Species Yarrowia lipolytica Positions 3061321..3062079
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 759 (nuc.)
Previous locus YALI0D23507r Next locus YALI0D23573g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D23551g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D23551gYALI0D23551g_mRNA-001YALI0D23551g_CDS-001

Nucleotide sequence

 

>YALI0D23551g
ATGTCGGCCAAAAGCGACTCGAGAAACAACAAGGCCGTGAAAAGCGACGAACCCAAGAAA
CGGCGGCGAAAGAAGGCCCGAACCGCCGAAGTTTCGGACTCCGACTCCAGTGACAGTGAA
TCTGACCGGGCGGAAGAAGACGATAATGAAGACAACGAAGACACTACAAATCACGTAATC
GACGAAGGTGACGTCGAAATGATGGAGTTTGACAAAGATGATGCTGCTGCTGCCGCTTCG
GCCCAGACTATGGACATCCCAGCAGAACTGCAATCTCTTCCAGCTGACTCAGCCAACCCC
GAGTTTCAAAAGTTTTACCTGAACCTGGTCACCTCCGAGTTTGGCAAGGATATGGACGAG
CTGCGAACGAGCAAGACTTTTAATGACAACACTCTGGGTTTGTTGGTTGATGCGCTAAAG
CAGGGAGTGAATGTGTTTGATGAAAAGGTGCAGGGGGAAATTGTCCAGCAACAATCATGA
GCAGTTTGAGCGAAGCTGGAACTGCGATGATTGGGGTGAGCGAACAGTGATGAGCGCGCC
GTCTTGAGCGCATTATCATGAGCGCACAGTCTTGAGCATATGAATGTCTGGATAGTTGTG
GACACTGAGGCTGCGAGAATATACATCGCAGTCACAGCTATTGAAAGAGAGGAGACAGCT
GTTGATCAGTGACATCCATTTTGTCAGCCTCTCAGTGTCATCTCCAACTGCCGAGGAAAA
AGGATAACAGGTATTTAATAGAATGTTTTCATGAAGTGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D23551g_CDS-001

Protein length: 160 aa.
Product: Protein with a likely role in ribosomal maturation, putative

>YALI0D23551g_CDS-001 MSAKSDSRNNKAVKSDEPKKRRRKKARTAEVSDSDSSDSESDRAEEDDNEDNEDTTNHVI
DEGDVEMMEFDKDDAAAAASAQTMDIPAELQSLPADSANPEFQKFYLNLVTSEFGKDMDE
LRTSKTFNDNTLGLLVDALKQGVNVFDEKVQGEIVQQQS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG