YALI0D23573g

Overview

Description similar to uniprot|Q9USQ4 Schizosaccharomyces pombe Hypothetical coiled-coil protein, possible histone binding
Locus type CDS
Locus tag YALI0D23573g

Location

Species Yarrowia lipolytica Positions 3062449..3063631
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1183 (nuc.)
Previous locus YALI0D23551g Next locus YALI0D23595g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D23573g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D23573gYALI0D23573g_mRNA-001YALI0D23573g_CDS-001

Nucleotide sequence

 

>YALI0D23573g
ATGACCTATAGCGCTGAAATCGAGCAATTGGTGGCTCTGGGCTCCAAGGCATACGCTCTG
AAGCACTACGAGAGCGCCACCGAGACTCTGGGCCAGGCGTGTGAGAAGTACAGTGACGAG
ACTGGCAAGGAAGATGGTCATTTACTGTTTCTTTACGGTCGGGCTCTTTTCCAGGCCGGA
GTGAGTTCTTCCAATGTTCTTGGCGGCGGAGAAAACCCCGGAGAGACTACTGGCGAGGAA
GTTGAGGTTCCTGTGAAGTCTTCTGGAGCTTTTCAGTTTGAAGAGGCTCCAGAGGAGGTC
GAAGAAGTTGAAGAGGTCGAAGAGGAGGTTTCTGAAAGCAAGGGAAAGGAAAAGGCTGAA
GAAGGTGATGCGGGGGAGGCAGAAGAGGAAGGAGAAGATGAGGAAGCTCCTCAGACTGAT
TTTGAGGTGGCTTGGGAAGTCACTGATCTGGCCAGAAAGTTGTTTGAAGATGAACTTGCC
GAGGAGGGGGTTTCAGCGGAGCGGATCACAGAGATTGAGAAACAGCTGGCCGAGGTGTAC
GACATCCTGGGCGAGATTTCTCTCGAGTCTGAGAACTTCAACCAGGCCGTGGTAGATCTG
GGACGGTCGGTAGAGCTCAAGGATAAACACAATGAGTTCCAATCAACTGTCATGAGTGAG
GCTCATTACAAGTACTCTCTGGCCCTCGAGTTTTGTCCCGAGGACTCGGCCAACAAGCAA
AAGGCCGTGGATCAGATGATTCTGGCAATTGACTCGGTGAAGAAGCGAATTGCCATGACT
GGCGAGAAAGACGACGATCTAGTGTCTGATTTGGAGATTCGGCTCAAAGATCTCAAGGCC
ATTGCCAAGGGTCAGGCTGACTTCGATGCCAAGAAACAGGCCGTCATGGAAGGTATTCTG
GGTAACTCTTCTGATGATGTTGTCAAGAACATTATGGCTGCTGCAGGTGTCGGCGGATCA
GGAGAGAAGCAGGTTAACGACCTGTCTGGATTGGCTGTTCGAAAGAAGGCCCCAAAGCGA
GTTGCTCCTGTGGCCGTAGAGGATGAACAGAGTGGAGAGAAGAAAGCCAAGGTGGAGGAG
AAGGCTGCTGAGGAGACTGAAGAGAAGAAAGAGTAGGAGTAGGAGAGAAACCAATGGGAT
GGTCGCTACTGGTGTATAATTAATATTGTATTGTTTTGAATCG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D23573g_CDS-001

Protein length: 372 aa.
Product: Coiled-coil protein, possible histone binding, putative

>YALI0D23573g_CDS-001 MTYSAEIEQLVALGSKAYALKHYESATETLGQACEKYSDETGKEDGHLLFLYGRALFQAG
VSSSNVLGGGENPGETTGEEVEVPVKSSGAFQFEEAPEEVEEVEEVEEEVSESKGKEKAE
EGDAGEAEEEGEDEEAPQTDFEVAWEVTDLARKLFEDELAEEGVSAERITEIEKQLAEVY
DILGEISLESENFNQAVVDLGRSVELKDKHNEFQSTVMSEAHYKYSLALEFCPEDSANKQ
KAVDQMILAIDSVKKRIAMTGEKDDDLVSDLEIRLKDLKAIAKGQADFDAKKQAVMEGIL
GNSSDDVVKNIMAAAGVGGSGEKQVNDLSGLAVRKKAPKRVAPVAVEDEQSGEKKAKVEE
KAAEETEEKKE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG