YALI0D23386g

Overview

Description similar to uniprot|Q6PIX1 Homo sapiens ATG10 Ubiquitin-like-conjugating enzyme
Locus type CDS
Locus tag YALI0D23386g

Location

Species Yarrowia lipolytica Positions 3040051..3041307
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1257 (nuc.)
Previous locus YALI0D23375g Next locus YALI0D23397g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D23386g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D23386gYALI0D23386g_mRNA-001YALI0D23386g_CDS-001

Nucleotide sequence

 

>YALI0D23386g
ATGGAAGGATTCAAGGAGCTGCAAGACGGGTGGCCCGAGGACTGTCACGTGAGATGGAGA
GACCAGGTGAGTTAACAGGTTATGAGCTTTGTGCTCCACAAGTCGTTTTTTCTACAAGTT
CAGCCTCGTCGGCCAAAAGCCGCAACGTTTGCCACGCACCTCAGGTGTACGTCCGTCATG
ACCAACCTGTCGTACTCGCTCGTACCCAAGGCTAACTCAGAACCTCCAGATCACGAGAAT
AGGGCCTTCACACCAAACGGCCAAATATGACATTTTGTGGTCGCACATATACGTGTGTCC
GGTGGTATATATGAGCTGTTATAGAGACAGCGAGCCCGTGACGTTACTGGCCGATTTTGT
GGCGTTTATGGCGGAGTTTGGGGTGGTAATTACTCCTGACATTGCAATCACTCAAGGTGA
GCATCCTCACACCGGTTTGCCCGTGTTTTTTCTGCATCCTTGTAAAACGAGGGAGACGGT
AGATCTGGTGATGCAGGATGAGGAGATGCACAAGAGGAGTGAGGCGGAGGTGTGGTTGGA
GAGTTATGGCCGAATCGTTGGTCTTCATCGACGAGCGCGATGATGAGATTCACCAGCGGT
TTGAGATGACTGATCAAGGAGCTACGCTACAGTTGAATATCGGGGGTGATGGAACTGTGA
GTCAGGGATTCACCCAGGCCGGGTCCAAGGGGTCTGTTCTGTTTGGTCATTCCTGTGTAT
TTGGTCTTGAACGTCTTCCAGGGCTTCGAACCTGGCCCTGGTGGTTCTGAGAGTGACTTT
GGTCTATCAAGATAGAGCTCTGATGTCGAAAGCTCTGATGTCAAGAGATCTGATGTCCAA
TCGCCTGACACCTATGTTCTAGACATATGATACTTGATGCAAAACGTGTTCAGAGTCCAA
GTATTTTACTCGTGCGGTTCTTCGAAAGGATTGCTTGCAGCACAGACTGGTTCTTCTGTT
CTTCTGTTGGTTGACGGACAAACGCATTGCTCAGGTTCGTCAATCATGGTCTCGAACGTG
AATCAGCAGACGAGTAGTTCAGTCGAGTACTGCTAGATATTGACAGGCTAGTTCTAGCTC
TCCTGTGATTTGTCCTACCAAACCAAGTACACTTATCGTCTGTTACATCAACAGGAACTA
GCTGTTAGAAGAGTTGCCGGTCTGCTTTCTAGAGACATTTCATTCTCGTCGTCAAGAACA
CCTTGATAGCTCCGACCAAGAGTCTCTTATGTTATTAATTGATTGATTGCTTCTATT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D23386g_CDS-001

Protein length: 143 aa.
Product: Ubiquitin-like-conjugating enzyme, putative

>YALI0D23386g_CDS-001 MEGFKELQDGWPEDCHVRWRDQNLQITRIGPSHQTAKYDILWSHIYVCPVVYMSCYRDSE
PVTLLADFVAFMAEFGVVITPDIAITQGEHPHTGLPVFFLHPCKTRETVDLVMQDEEMHK
RSEAEVWLESYGRIVGLHRRAR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG